RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 STAG1Q8WVM7 1258 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 CAPZA3Q96KX2 299 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 PANX2Q96RD6 677 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 SLC24A3Q9HC58 644 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 CD248Q9HCU0 757 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 RBM28Q9NW13 759 aaKnown RBP8.24□□□□□ -1.09
TRIM6-202ENST00000380097 TLR7Q9NYK1 1049 aaKnown RBP8.24□□□□□ -1.09
TRIM6-202ENST00000380097 NRXN3Q9Y4C0 1643 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 A0A1B0GUA9 196 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 PDIA3P30101 505 aaKnown RBP8.24□□□□□ -1.09
TRIM6-202ENST00000380097 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 KLHL10Q6JEL2 608 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 RAD9BQ6WBX8 426 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 BRINP3Q76B58 766 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 SGSM3Q96HU1 749 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 INTS13Q9NVM9 706 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 CHPF2Q9P2E5 772 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 GUCA1BQ9UMX6 200 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 ARHGAP23Q9P227 1491 aa8.24□□□□□ -1.09
TRIM6-202ENST00000380097 EIF3HO15372 352 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 OPA1O60313 960 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 EZRP15311 586 aaKnown RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 GPTP24298 496 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 CLNS1AP54105 237 aaKnown RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 RBL2Q08999 1139 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 USPL1Q5W0Q7 1092 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 PRAMEF22A3QJZ6 481 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 PRPF6O94906 941 aaKnown RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 RAB11FIP4Q86YS3 637 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 CNGA4Q8IV77 575 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 ACRBPQ8NEB7 543 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 RAPGEF4Q8WZA2 1011 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 MIEF2Q96C03 454 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 EHD4Q9H223 541 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 KCNH3Q9ULD8 1083 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 ANKRD26Q9UPS8 1709 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 MED23Q9ULK4 1368 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 A0A0U1RQJ8 604 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 A6NNZ2 444 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 BTBD11A6QL63 1104 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 USP14P54578 494 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 CKAP4Q07065 602 aaKnown RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 SLC39A14Q15043 492 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 TSR1Q2NL82 804 aaKnown RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 TUBB8Q3ZCM7 444 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 IQCA1Q86XH1 822 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 SPATS2Q86XZ4 545 aaKnown RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 MLKLQ8NB16 471 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 IL17REQ8NFR9 667 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 ATRIPQ8WXE1 791 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 ZNF274Q96GC6 653 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-202ENST00000380097 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
TRIM6-202ENST00000380097 GOLGA6L7A0A1B0GV03 622 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 TRIM29Q14134 588 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 NAA25Q14CX7 972 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 IQCEQ6IPM2 695 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SND1Q7KZF4 910 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SCLT1Q96NL6 688 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SELENOOQ9BVL4 669 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 TRIM6Q9C030 488 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SAMSN1Q9NSI8 373 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 MAP2P11137 1827 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 FRMD3A2A2Y4 597 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 GOLGA8BA8MQT2 603 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 GOLGA8KD6RF30 607 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 ENC1O14682 589 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 MEFVO15553 781 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SASH1O94885 1247 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SSBP05455 408 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 PDE4BQ07343 736 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 ZNF827Q17R98 1081 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 LONRF3Q496Y0 759 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 DDX46Q7L014 1031 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 TMTC1Q8IUR5 882 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 GSPT2Q8IYD1 628 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 CCDC114Q96M63 670 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 HINFPQ9BQA5 517 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 A1CFQ9NQ94 594 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 GJB4Q9NTQ9 266 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 MYO1AQ9UBC5 1043 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 SLIT1O75093 1534 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 PTCD1O75127 700 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 IPO7O95373 1038 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 GCFC2P16383 781 aaKnown RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 ERCC3P19447 782 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 ARID4AP29374 1257 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 CASP14P31944 242 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 ACTN3Q08043 901 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-202ENST00000380097 RASGRP2Q7LDG7 609 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 TEX11Q8IYF3 940 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 STK11IPQ8N1F8 1099 aa8.22□□□□□ -1.09
TRIM6-202ENST00000380097 KCNH5Q8NCM2 988 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms