RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
RFC3-201ENST00000380071 CCDC150Q8NCX0 1101 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 SDR42E1Q8WUS8 393 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 CCDC87Q9NVE4 849 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.99□□□□□ -0.17
RFC3-201ENST00000380071 ZNF215Q9UL58 517 aaPredicted RBP13.99□□□□□ -0.17
RFC3-201ENST00000380071 V9GYY5 206 aaPredicted RBP13.99□□□□□ -0.17
RFC3-201ENST00000380071 ARAP2Q8WZ64 1704 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 NHSL1Q5SYE7 1610 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 MYL5Q02045 173 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 PPP1R13BQ96KQ4 1090 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 FANCLQ9NW38 375 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 NIP7Q9Y221 180 aaKnown RBP eCLIP13.99□□□□□ -0.17
RFC3-201ENST00000380071 PCDHB6Q9Y5E3 794 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 PNPLA7Q6ZV29 1317 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 MINDY4BA8MYZ0 360 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 SERPINC1P01008 464 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 GNAT2P19087 354 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 ATP2B1P20020 1258 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 CYP7A1P22680 504 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 GOLGA8FQ08AF8 430 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 GOLGA8DPQ0D2H9 430 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 HSP90AA4PQ58FG1 418 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 TRIM22Q8IYM9 498 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 KIF18AQ8NI77 898 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 WASF1Q92558 559 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 ABCF2Q9UG63 623 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 TMEM232C9JQI7 657 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 NTSR2O95665 410 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 PPARAQ07869 468 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 ITPK1Q13572 414 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 SART3Q15020 963 aaKnown RBP13.98□□□□□ -0.17
RFC3-201ENST00000380071 SAFBQ15424 915 aaKnown RBP eCLIP13.98□□□□□ -0.17
RFC3-201ENST00000380071 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
RFC3-201ENST00000380071 FBXO2Q9UK22 296 aaPredicted RBP13.98□□□□□ -0.17
RFC3-201ENST00000380071 ERICH2A1L162 156 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 PTPREP23469 700 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 CFAP100Q494V2 611 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 ZNF654Q8IZM8 581 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 SHISA4Q96DD7 197 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 NID2Q14112 1375 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 COL4A1P02462 1669 aa13.97□□□□□ -0.17
RFC3-201ENST00000380071 POLR2DO15514 142 aaKnown RBP13.96□□□□□ -0.17
RFC3-201ENST00000380071 DEXIO95424 95 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 GYG1P46976 350 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 DMTNQ08495 405 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 GRAMD1CQ8IYS0 662 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 FOXP1Q9H334 677 aaPredicted RBP13.96□□□□□ -0.17
RFC3-201ENST00000380071 SERTAD1Q9UHV2 236 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 SIK1P57059 783 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 SYT10Q6XYQ8 523 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 USP49Q70CQ1 688 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 CABP5Q9NP86 173 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 MAN1B1Q9UKM7 699 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 TIAM2Q8IVF5 1701 aa13.96□□□□□ -0.17
RFC3-201ENST00000380071 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 PSDA5PKW4 1024 aaPredicted RBP13.95□□□□□ -0.18
RFC3-201ENST00000380071 PARP10Q53GL7 1025 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 RILPL1Q5EBL4 403 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 TMTC2Q8N394 836 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 PDILTQ8N807 584 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 RAI14Q9P0K7 980 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 BCORQ6W2J9 1755 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 CYP2D7A0A087X1C5 515 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 POSTNQ15063 836 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 SEC23AQ15436 765 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 RNF41Q9H4P4 317 aaPredicted RBP13.95□□□□□ -0.18
RFC3-201ENST00000380071 INTS13Q9NVM9 706 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
RFC3-201ENST00000380071 TNKSO95271 1327 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 FMR1Q06787 632 aaKnown RBP eCLIP13.94□□□□□ -0.18
RFC3-201ENST00000380071 VSTM4Q8IW00 320 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
RFC3-201ENST00000380071 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 CBFA2T2O43439 604 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 DYNLL1P63167 89 aaKnown RBP13.94□□□□□ -0.18
RFC3-201ENST00000380071 EARS2Q5JPH6 523 aaKnown RBP13.94□□□□□ -0.18
RFC3-201ENST00000380071 CSRNP2Q9H175 543 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 TMX1Q9H3N1 280 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 VPS54Q9P1Q0 977 aa13.94□□□□□ -0.18
RFC3-201ENST00000380071 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
RFC3-201ENST00000380071 ZHX1Q9UKY1 873 aaPredicted RBP13.94□□□□□ -0.18
RFC3-201ENST00000380071 MYH14Q7Z406 1995 aaKnown RBP13.94□□□□□ -0.18
RFC3-201ENST00000380071 KIF2AO00139 706 aaPredicted RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 NPHP1O15259 732 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 PRDM1O75626 825 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 SLU7O95391 586 aaKnown RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 SARSP49591 514 aaKnown RBP13.93□□□□□ -0.18
RFC3-201ENST00000380071 DDB1Q16531 1140 aa13.93□□□□□ -0.18
RFC3-201ENST00000380071 ELOA2Q8IYF1 753 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms