RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
NEDD9-201ENST00000379433 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 IGDCC4Q8TDY8 1250 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 TGFBRAP1Q8WUH2 860 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 MYH3P11055 1940 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 TNKSO95271 1327 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 ST5P78524 1137 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 PICALMQ13492 652 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 CCDC73Q6ZRK6 1079 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 APBB1IPQ7Z5R6 666 aaPredicted RBP12.5□□□□□ -0.41
NEDD9-201ENST00000379433 DRC7Q8IY82 874 aa12.5□□□□□ -0.41
NEDD9-201ENST00000379433 GPSM2P81274 684 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 ANO6Q4KMQ2 910 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 KRT40Q6A162 431 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 ZNF512BQ96KM6 892 aaPredicted RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 TSPY2A6NKD2 308 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 TM4SF1P30408 202 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 RTN1Q16799 776 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 CCDC96Q2M329 555 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 LLPHQ9BRT6 129 aaKnown RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 ALDH8A1Q9H2A2 487 aaPredicted RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 ZSCAN16Q9H4T2 348 aaPredicted RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 AKAP11Q9UKA4 1901 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 AKAP17AQ02040 695 aaKnown RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
NEDD9-201ENST00000379433 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 GOLPH3LQ9H4A5 285 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 STX8Q9UNK0 236 aa12.49□□□□□ -0.41
NEDD9-201ENST00000379433 ADCY5O95622 1261 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 CCDC192P0DO97 292 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 NR5A1Q13285 461 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 IFIT1BQ5T764 474 aaKnown RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 C17orf53Q8N3J3 647 aaPredicted RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 COL1A1P02452 1464 aaPredicted RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 KINO60870 393 aaKnown RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 SLURP2P0DP57 97 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 MAP2K1Q02750 393 aaPredicted RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 PROM2Q8N271 834 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 OTUD6BQ8N6M0 293 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 PDILTQ8N807 584 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 ESR2Q92731 530 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 AGXT2Q9BYV1 514 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 KRT23Q9C075 422 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 VPS54Q9P1Q0 977 aa12.48□□□□□ -0.41
NEDD9-201ENST00000379433 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
NEDD9-201ENST00000379433 SCNN1DP51172 638 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 EIF6P56537 245 aaKnown RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 GTF2IP78347 998 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 TYRO3Q06418 890 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 DDR1Q08345 913 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 GRAPQ13588 217 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 TSHZ1Q6ZSZ6 1077 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 GRAPLQ8TC17 118 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 SH3RF3Q8TEJ3 882 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 PCDHA7Q9UN72 937 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 ZRSR1Q15695 479 aaKnown RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 RASGRP2Q7LDG7 609 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 V9GY48 417 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 NRAPQ86VF7 1730 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 FOXD4Q12950 439 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 NBPF9Q3BBW0 867 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 HSP90AA4PQ58FG1 418 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 MFSD14BQ5SR56 506 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
NEDD9-201ENST00000379433 CRNKL1Q9BZJ0 848 aaKnown RBP12.47□□□□□ -0.41
NEDD9-201ENST00000379433 ZMYM6O95789 1325 aa12.46□□□□□ -0.41
NEDD9-201ENST00000379433 PLEKHA8P1O95397 391 aa12.46□□□□□ -0.41
NEDD9-201ENST00000379433 GNAT2P19087 354 aa12.46□□□□□ -0.41
NEDD9-201ENST00000379433 IQCA1Q86XH1 822 aa12.46□□□□□ -0.41
NEDD9-201ENST00000379433 TRIM22Q8IYM9 498 aa12.46□□□□□ -0.41
NEDD9-201ENST00000379433 SSR1P43307 286 aaKnown RBP12.46□□□□□ -0.42
NEDD9-201ENST00000379433 ATP2B2Q01814 1243 aa12.46□□□□□ -0.42
NEDD9-201ENST00000379433 ZNF827Q17R98 1081 aa12.46□□□□□ -0.42
NEDD9-201ENST00000379433 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.42
NEDD9-201ENST00000379433 UTP14CQ5TAP6 766 aaKnown RBP12.46□□□□□ -0.42
NEDD9-201ENST00000379433 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.42
NEDD9-201ENST00000379433 TMEM87BQ96K49 555 aa12.46□□□□□ -0.42
NEDD9-201ENST00000379433 NOL10Q9BSC4 688 aaKnown RBP12.46□□□□□ -0.42
NEDD9-201ENST00000379433 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.42
NEDD9-201ENST00000379433 DCP1AQ9NPI6 582 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms