RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
UPK1A-202ENST00000379013 ANKRD13AQ8IZ07 590 aa16.59■□□□□ 0.25
UPK1A-202ENST00000379013 ZKSCAN4Q969J2 545 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-202ENST00000379013 CRNKL1Q9BZJ0 848 aaKnown RBP16.59■□□□□ 0.25
UPK1A-202ENST00000379013 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
UPK1A-202ENST00000379013 CCDC171Q6TFL3 1326 aa16.59■□□□□ 0.25
UPK1A-202ENST00000379013 UNCXA6NJT0 531 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 BTDP43251 543 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 PPP4CP60510 307 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 FAM151AQ8WW52 585 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 OPTNQ96CV9 577 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 ESYT1Q9BSJ8 1104 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
UPK1A-202ENST00000379013 A0A0D9SFI3 127 aa16.57■□□□□ 0.24
UPK1A-202ENST00000379013 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
UPK1A-202ENST00000379013 CCDC85CA6NKD9 419 aa16.57■□□□□ 0.24
UPK1A-202ENST00000379013 GPR25O00155 361 aa16.57■□□□□ 0.24
UPK1A-202ENST00000379013 SGSM2O43147 1006 aa16.57■□□□□ 0.24
UPK1A-202ENST00000379013 GPAA1O43292 621 aa16.57■□□□□ 0.24
UPK1A-202ENST00000379013 ZBTB48P10074 688 aaPredicted RBP16.57■□□□□ 0.24
UPK1A-202ENST00000379013 TNNI2P48788 182 aa16.57■□□□□ 0.24
UPK1A-202ENST00000379013 DDX4Q9NQI0 724 aaKnown RBP16.57■□□□□ 0.24
UPK1A-202ENST00000379013 AATFQ9NY61 560 aaKnown RBP eCLIP16.57■□□□□ 0.24
UPK1A-202ENST00000379013 MYH1P12882 1939 aa16.57■□□□□ 0.24
UPK1A-202ENST00000379013 LAMB1P07942 1786 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 MANSC4A6NHS7 340 aaPredicted RBP16.56■□□□□ 0.24
UPK1A-202ENST00000379013 MBD4O95243 580 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 INPP5BP32019 993 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 BRI3BPQ8WY22 251 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 FAM227BQ96M60 508 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 LAMA4Q16363 1823 aa16.56■□□□□ 0.24
UPK1A-202ENST00000379013 WDHD1O75717 1129 aaPredicted RBP16.55■□□□□ 0.24
UPK1A-202ENST00000379013 RHBDL3P58872 404 aa16.55■□□□□ 0.24
UPK1A-202ENST00000379013 SREBF2Q12772 1141 aa16.55■□□□□ 0.24
UPK1A-202ENST00000379013 GIMAP6Q6P9H5 292 aa16.55■□□□□ 0.24
UPK1A-202ENST00000379013 MIGA1Q8NAN2 632 aa16.55■□□□□ 0.24
UPK1A-202ENST00000379013 PUS7LQ9H0K6 701 aaKnown RBP16.55■□□□□ 0.24
UPK1A-202ENST00000379013 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
UPK1A-202ENST00000379013 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
UPK1A-202ENST00000379013 TNRC18O15417 2968 aaPredicted RBP16.55■□□□□ 0.24
UPK1A-202ENST00000379013 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 MCCP23508 829 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 USP5P45974 858 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 TEX11Q8IYF3 940 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
UPK1A-202ENST00000379013 DSCC1Q9BVC3 393 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 OTOFQ9HC10 1997 aa16.54■□□□□ 0.24
UPK1A-202ENST00000379013 BAZ2AQ9UIF9 1905 aaKnown RBP16.54■□□□□ 0.24
UPK1A-202ENST00000379013 MKI67P46013 3256 aaKnown RBP16.53■□□□□ 0.24
UPK1A-202ENST00000379013 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 BRCA2P51587 3418 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 DDTLA6NHG4 134 aaPredicted RBP16.53■□□□□ 0.24
UPK1A-202ENST00000379013 M0R2C6 588 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
UPK1A-202ENST00000379013 APPP05067 770 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 INHBEP58166 350 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 C8orf34Q49A92 452 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 CTU1Q7Z7A3 348 aaKnown RBP16.53■□□□□ 0.24
UPK1A-202ENST00000379013 ADGRA1Q86SQ6 560 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 STRBPQ96SI9 672 aaKnown RBP16.53■□□□□ 0.24
UPK1A-202ENST00000379013 IDI2Q9BXS1 227 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 SLC4A4Q9Y6R1 1079 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 MYH8P13535 1937 aa16.53■□□□□ 0.24
UPK1A-202ENST00000379013 SPDYE5A6NIY4 337 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 PHF20L1A8MW92 1017 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.24
UPK1A-202ENST00000379013 IRF6O14896 467 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 CRHR2Q13324 411 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 NOM1Q5C9Z4 860 aaKnown RBP16.52■□□□□ 0.24
UPK1A-202ENST00000379013 RNF20Q5VTR2 975 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 NAPBQ9H115 298 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 ARMT1Q9H993 441 aa16.52■□□□□ 0.24
UPK1A-202ENST00000379013 COL2A1P02458 1487 aaPredicted RBP16.52■□□□□ 0.23
UPK1A-202ENST00000379013 DDX60LQ5H9U9 1706 aaKnown RBP16.51■□□□□ 0.23
UPK1A-202ENST00000379013 TDO2P48775 406 aa16.51■□□□□ 0.23
UPK1A-202ENST00000379013 MAP3K10Q02779 954 aa16.51■□□□□ 0.23
UPK1A-202ENST00000379013 SEC62Q99442 399 aaKnown RBP16.51■□□□□ 0.23
UPK1A-202ENST00000379013 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
UPK1A-202ENST00000379013 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
UPK1A-202ENST00000379013 CCL15-CCL14A0A0B4J2E2 113 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 FKTNO75072 461 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 ENTPD3O75355 529 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 SLC3A2P08195 630 aaKnown RBP16.5■□□□□ 0.23
UPK1A-202ENST00000379013 HSPD1P10809 573 aaKnown RBP16.5■□□□□ 0.23
UPK1A-202ENST00000379013 MOGSQ13724 837 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
UPK1A-202ENST00000379013 ALX1Q15699 326 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 CCL15Q16663 113 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms