RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 SLC4A8Q2Y0W8 1093 aa24.74■■□□□ 1.55
TRIM13-203ENST00000378183 NOL9Q5SY16 702 aaKnown RBP24.74■■□□□ 1.55
TRIM13-203ENST00000378183 METTL16Q86W50 562 aaKnown RBP24.74■■□□□ 1.55
TRIM13-203ENST00000378183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.74■■□□□ 1.55
TRIM13-203ENST00000378183 ATAD5Q96QE3 1844 aa24.74■■□□□ 1.55
TRIM13-203ENST00000378183 SPDYE5A6NIY4 337 aa24.73■■□□□ 1.55
TRIM13-203ENST00000378183 RRP1BQ14684 758 aaKnown RBP24.73■■□□□ 1.55
TRIM13-203ENST00000378183 AIDAQ96BJ3 306 aa24.73■■□□□ 1.55
TRIM13-203ENST00000378183 STRBPQ96SI9 672 aaKnown RBP24.73■■□□□ 1.55
TRIM13-203ENST00000378183 DNAJC18Q9H819 358 aa24.73■■□□□ 1.55
TRIM13-203ENST00000378183 DCP1AQ9NPI6 582 aaPredicted RBP24.73■■□□□ 1.55
TRIM13-203ENST00000378183 M0R2C6 588 aa24.72■■□□□ 1.55
TRIM13-203ENST00000378183 FOXP4Q8IVH2 680 aaPredicted RBP24.72■■□□□ 1.55
TRIM13-203ENST00000378183 SEC62Q99442 399 aaKnown RBP24.72■■□□□ 1.55
TRIM13-203ENST00000378183 HERC5Q9UII4 1024 aaKnown RBP24.72■■□□□ 1.55
TRIM13-203ENST00000378183 PHIPQ8WWQ0 1821 aa24.72■■□□□ 1.55
TRIM13-203ENST00000378183 FOXN1O15353 648 aa24.71■■□□□ 1.55
TRIM13-203ENST00000378183 TM4SF4P48230 202 aa24.71■■□□□ 1.55
TRIM13-203ENST00000378183 EVX2Q03828 476 aa24.71■■□□□ 1.55
TRIM13-203ENST00000378183 LRRFIP1Q32MZ4 808 aaKnown RBP24.71■■□□□ 1.55
TRIM13-203ENST00000378183 ZMYM1Q5SVZ6 1142 aa24.71■■□□□ 1.55
TRIM13-203ENST00000378183 ERO1BQ86YB8 467 aa24.71■■□□□ 1.55
TRIM13-203ENST00000378183 REM2Q8IYK8 340 aaPredicted RBP24.71■■□□□ 1.55
TRIM13-203ENST00000378183 OTUD5Q96G74 571 aa24.71■■□□□ 1.55
TRIM13-203ENST00000378183 CTNND1O60716 968 aaKnown RBP24.7■■□□□ 1.54
TRIM13-203ENST00000378183 HLA-DOAP06340 250 aa24.7■■□□□ 1.54
TRIM13-203ENST00000378183 PLCD1P51178 756 aa24.7■■□□□ 1.54
TRIM13-203ENST00000378183 SCYL3Q8IZE3 742 aa24.7■■□□□ 1.54
TRIM13-203ENST00000378183 ATP8A2Q9NTI2 1148 aa24.7■■□□□ 1.54
TRIM13-203ENST00000378183 MCM9Q9NXL9 1143 aa24.7■■□□□ 1.54
TRIM13-203ENST00000378183 SLC4A4Q9Y6R1 1079 aa24.7■■□□□ 1.54
TRIM13-203ENST00000378183 TRIM6-TRIM34B2RNG4 842 aa24.69■■□□□ 1.54
TRIM13-203ENST00000378183 MS4A4AQ96JQ5 239 aa24.69■■□□□ 1.54
TRIM13-203ENST00000378183 MANSC4A6NHS7 340 aaPredicted RBP24.68■■□□□ 1.54
TRIM13-203ENST00000378183 GPAA1O43292 621 aa24.68■■□□□ 1.54
TRIM13-203ENST00000378183 CYP2D6P10635 497 aa24.68■■□□□ 1.54
TRIM13-203ENST00000378183 PPATQ06203 517 aa24.68■■□□□ 1.54
TRIM13-203ENST00000378183 TTC6Q86TZ1 520 aa24.68■■□□□ 1.54
TRIM13-203ENST00000378183 RILPL2Q969X0 211 aa24.68■■□□□ 1.54
TRIM13-203ENST00000378183 EHD4Q9H223 541 aa24.68■■□□□ 1.54
TRIM13-203ENST00000378183 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.68■■□□□ 1.54
TRIM13-203ENST00000378183 GSG1L2A8MUP6 293 aa24.67■■□□□ 1.54
TRIM13-203ENST00000378183 IRF6O14896 467 aa24.67■■□□□ 1.54
TRIM13-203ENST00000378183 POLR3DP05423 398 aaPredicted RBP24.67■■□□□ 1.54
TRIM13-203ENST00000378183 NEFLP07196 543 aa24.67■■□□□ 1.54
TRIM13-203ENST00000378183 PPIL2Q13356 520 aa24.67■■□□□ 1.54
TRIM13-203ENST00000378183 CENPQQ7L2Z9 268 aaPredicted RBP24.67■■□□□ 1.54
TRIM13-203ENST00000378183 CRACR2BQ8N4Y2 399 aaPredicted RBP24.67■■□□□ 1.54
TRIM13-203ENST00000378183 BEGAINQ9BUH8 593 aa24.67■■□□□ 1.54
TRIM13-203ENST00000378183 RNF186Q9NXI6 227 aa24.67■■□□□ 1.54
TRIM13-203ENST00000378183 TESPA1A2RU30 521 aaPredicted RBP24.66■■□□□ 1.54
TRIM13-203ENST00000378183 PTPRAP18433 802 aa24.66■■□□□ 1.54
TRIM13-203ENST00000378183 CAP2P40123 477 aa24.66■■□□□ 1.54
TRIM13-203ENST00000378183 JAG1P78504 1218 aa24.66■■□□□ 1.54
TRIM13-203ENST00000378183 SREBF2Q12772 1141 aa24.66■■□□□ 1.54
TRIM13-203ENST00000378183 SERPINB13Q9UIV8 391 aa24.66■■□□□ 1.54
TRIM13-203ENST00000378183 TSKSQ9UJT2 592 aa24.66■■□□□ 1.54
TRIM13-203ENST00000378183 SMIM22K7EJ46 135 aa24.65■■□□□ 1.54
TRIM13-203ENST00000378183 HSPA8P11142 646 aaKnown RBP24.65■■□□□ 1.54
TRIM13-203ENST00000378183 GSPT1P15170 499 aaKnown RBP24.65■■□□□ 1.54
TRIM13-203ENST00000378183 GABPAQ06546 454 aa24.65■■□□□ 1.54
TRIM13-203ENST00000378183 SHROOM1Q2M3G4 852 aaPredicted RBP24.65■■□□□ 1.54
TRIM13-203ENST00000378183 TTC22Q5TAA0 569 aa24.65■■□□□ 1.54
TRIM13-203ENST00000378183 TICAM2Q86XR7 235 aa24.65■■□□□ 1.54
TRIM13-203ENST00000378183 PTPN18Q99952 460 aa24.65■■□□□ 1.54
TRIM13-203ENST00000378183 PICK1Q9NRD5 415 aa24.65■■□□□ 1.54
TRIM13-203ENST00000378183 PTPRFP10586 1907 aa24.65■■□□□ 1.54
TRIM13-203ENST00000378183 CYP2D7A0A087X1C5 515 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 USP17L12C9JPN9 530 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 USP17L21D6R901 530 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 IGF2BP3O00425 579 aaKnown RBP eCLIP24.64■■□□□ 1.54
TRIM13-203ENST00000378183 TRPA1O75762 1119 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 GTF2A2P52657 109 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 INHBEP58166 350 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 TATDN1Q6P1N9 297 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 CTR9Q6PD62 1173 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 CCDC129Q6ZRS4 1044 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 CCDC84Q86UT8 332 aaPredicted RBP24.64■■□□□ 1.54
TRIM13-203ENST00000378183 IFNL1Q8IU54 200 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 BRI3BPQ8WY22 251 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 FAM227BQ96M60 508 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 TRIM34Q9BYJ4 488 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 EPB41L4AQ9HCS5 686 aaPredicted RBP24.64■■□□□ 1.54
TRIM13-203ENST00000378183 KCNH4Q9UQ05 1017 aa24.64■■□□□ 1.54
TRIM13-203ENST00000378183 MYH8P13535 1937 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 A0A0D9SFI3 127 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 CA12O43570 354 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 SHMT1P34896 483 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 CTCFP49711 727 aaPredicted RBP24.63■■□□□ 1.53
TRIM13-203ENST00000378183 C12orf60Q5U649 245 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 HELLSQ9NRZ9 838 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 SAGE1Q9NXZ1 904 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 ZHX2Q9Y6X8 837 aa24.63■■□□□ 1.53
TRIM13-203ENST00000378183 PATL2C9JE40 543 aaKnown RBP24.62■■□□□ 1.53
TRIM13-203ENST00000378183 GDF11O95390 407 aa24.62■■□□□ 1.53
TRIM13-203ENST00000378183 GNAT2P19087 354 aa24.62■■□□□ 1.53
TRIM13-203ENST00000378183 SDSP20132 328 aa24.62■■□□□ 1.53
TRIM13-203ENST00000378183 NMIQ13287 307 aaPredicted RBP24.62■■□□□ 1.53
TRIM13-203ENST00000378183 GIMAP6Q6P9H5 292 aa24.62■■□□□ 1.53
TRIM13-203ENST00000378183 SKAP1Q86WV1 359 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms