RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DYNLL1P63167 89 aaKnown RBP20.42■□□□□ 0.86
HMGN4-201ENST00000377575 MIGA1Q8NAN2 632 aa20.42■□□□□ 0.86
HMGN4-201ENST00000377575 DCTPP1Q9H773 170 aa20.42■□□□□ 0.86
HMGN4-201ENST00000377575 CCDC85CA6NKD9 419 aa20.41■□□□□ 0.86
HMGN4-201ENST00000377575 BTBD19C9JJ37 291 aa20.41■□□□□ 0.86
HMGN4-201ENST00000377575 CXCL11O14625 94 aa20.41■□□□□ 0.86
HMGN4-201ENST00000377575 ERO1AQ96HE7 468 aa20.41■□□□□ 0.86
HMGN4-201ENST00000377575 TRIM34Q9BYJ4 488 aa20.41■□□□□ 0.86
HMGN4-201ENST00000377575 PAG1Q9NWQ8 432 aa20.41■□□□□ 0.86
HMGN4-201ENST00000377575 FAM196BA6NMK8 535 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 SMARCA5O60264 1052 aaPredicted RBP20.4■□□□□ 0.86
HMGN4-201ENST00000377575 HLA-DOAP06340 250 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 SLURP2P0DP57 97 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 PDE6AP16499 860 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 USP5P45974 858 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 SLC9C2Q5TAH2 1124 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 ANKRD23Q86SG2 305 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 BOLA2Q9H3K6 86 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 ZHX2Q9Y6X8 837 aa20.4■□□□□ 0.86
HMGN4-201ENST00000377575 SP3Q02447 781 aa20.39■□□□□ 0.85
HMGN4-201ENST00000377575 CRACR2BQ8N4Y2 399 aaPredicted RBP20.39■□□□□ 0.85
HMGN4-201ENST00000377575 HAUS7Q99871 368 aa20.39■□□□□ 0.85
HMGN4-201ENST00000377575 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.39■□□□□ 0.85
HMGN4-201ENST00000377575 LOC285556D6RIA3 1793 aa20.39■□□□□ 0.85
HMGN4-201ENST00000377575 ZNF532Q9HCE3 1301 aa20.38■□□□□ 0.85
HMGN4-201ENST00000377575 MAGEB6P1A0A0J9YX57 407 aa20.38■□□□□ 0.85
HMGN4-201ENST00000377575 CRBNQ96SW2 442 aa20.38■□□□□ 0.85
HMGN4-201ENST00000377575 TBC1D2Q9BYX2 928 aa20.38■□□□□ 0.85
HMGN4-201ENST00000377575 PALD1Q9ULE6 856 aa20.38■□□□□ 0.85
HMGN4-201ENST00000377575 AFG3L2Q9Y4W6 797 aa20.38■□□□□ 0.85
HMGN4-201ENST00000377575 PCDHB15Q9Y5E8 787 aa20.38■□□□□ 0.85
HMGN4-201ENST00000377575 A0A0G2JLL6 359 aaPredicted RBP20.37■□□□□ 0.85
HMGN4-201ENST00000377575 FBXO46Q6PJ61 603 aaPredicted RBP20.37■□□□□ 0.85
HMGN4-201ENST00000377575 FASTKD5Q7L8L6 764 aaKnown RBP20.37■□□□□ 0.85
HMGN4-201ENST00000377575 PRRT2Q7Z6L0 340 aaPredicted RBP20.37■□□□□ 0.85
HMGN4-201ENST00000377575 EDC3Q96F86 508 aaKnown RBP20.37■□□□□ 0.85
HMGN4-201ENST00000377575 RIOK1Q9BRS2 568 aaKnown RBP20.37■□□□□ 0.85
HMGN4-201ENST00000377575 ECHDC1Q9NTX5 307 aa20.37■□□□□ 0.85
HMGN4-201ENST00000377575 SAP30BPQ9UHR5 308 aaKnown RBP20.37■□□□□ 0.85
HMGN4-201ENST00000377575 PDHXO00330 501 aa20.36■□□□□ 0.85
HMGN4-201ENST00000377575 TLR2O60603 784 aa20.36■□□□□ 0.85
HMGN4-201ENST00000377575 CAP2P40123 477 aa20.36■□□□□ 0.85
HMGN4-201ENST00000377575 METTL16Q86W50 562 aaKnown RBP20.36■□□□□ 0.85
HMGN4-201ENST00000377575 FOXP4Q8IVH2 680 aaPredicted RBP20.36■□□□□ 0.85
HMGN4-201ENST00000377575 CD99L2Q8TCZ2 262 aa20.36■□□□□ 0.85
HMGN4-201ENST00000377575 CRNKL1Q9BZJ0 848 aaKnown RBP20.36■□□□□ 0.85
HMGN4-201ENST00000377575 TRIM17Q9Y577 477 aa20.36■□□□□ 0.85
HMGN4-201ENST00000377575 MYH8P13535 1937 aa20.35■□□□□ 0.85
HMGN4-201ENST00000377575 TCRBV5S4A2TA0A5A2 114 aa20.35■□□□□ 0.85
HMGN4-201ENST00000377575 TRIM75PA6NK02 468 aa20.35■□□□□ 0.85
HMGN4-201ENST00000377575 MOGSQ13724 837 aa20.35■□□□□ 0.85
HMGN4-201ENST00000377575 ARHGEF6Q15052 776 aa20.35■□□□□ 0.85
HMGN4-201ENST00000377575 OTOP1Q7RTM1 612 aa20.35■□□□□ 0.85
HMGN4-201ENST00000377575 PARK7Q99497 189 aaKnown RBP20.35■□□□□ 0.85
HMGN4-201ENST00000377575 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.35■□□□□ 0.85
HMGN4-201ENST00000377575 HPS5Q9UPZ3 1129 aa20.35■□□□□ 0.85
HMGN4-201ENST00000377575 ADD2P35612 726 aa20.34■□□□□ 0.85
HMGN4-201ENST00000377575 AAMPQ13685 434 aa20.34■□□□□ 0.85
HMGN4-201ENST00000377575 ZSCAN25Q6NSZ9 544 aa20.34■□□□□ 0.85
HMGN4-201ENST00000377575 GADL1Q6ZQY3 521 aa20.34■□□□□ 0.85
HMGN4-201ENST00000377575 DNAJC18Q9H819 358 aa20.34■□□□□ 0.85
HMGN4-201ENST00000377575 AS3MTQ9HBK9 375 aa20.34■□□□□ 0.85
HMGN4-201ENST00000377575 GINM1Q9NU53 330 aa20.34■□□□□ 0.85
HMGN4-201ENST00000377575 USP17L5A8MUK1 530 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 ASNSP08243 561 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 KIF22Q14807 665 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 SLC4A8Q2Y0W8 1093 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 TTC6Q86TZ1 520 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 ZNF280CQ8ND82 737 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 EHD4Q9H223 541 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 EFCC1Q9HA90 598 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 SLC45A1Q9Y2W3 748 aa20.33■□□□□ 0.85
HMGN4-201ENST00000377575 ZSWIM8A7E2V4 1837 aa20.32■□□□□ 0.84
HMGN4-201ENST00000377575 BAZ2AQ9UIF9 1905 aaKnown RBP20.32■□□□□ 0.84
HMGN4-201ENST00000377575 GPAT2Q6NUI2 795 aa20.32■□□□□ 0.84
HMGN4-201ENST00000377575 CCDC84Q86UT8 332 aaPredicted RBP20.32■□□□□ 0.84
HMGN4-201ENST00000377575 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
HMGN4-201ENST00000377575 SERPINB13Q9UIV8 391 aa20.32■□□□□ 0.84
HMGN4-201ENST00000377575 TTC41PQ6P2S7 1318 aa20.31■□□□□ 0.84
HMGN4-201ENST00000377575 ADGRA2Q96PE1 1338 aa20.31■□□□□ 0.84
HMGN4-201ENST00000377575 MGAMO43451 1857 aa20.31■□□□□ 0.84
HMGN4-201ENST00000377575 RRP1BQ14684 758 aaKnown RBP20.31■□□□□ 0.84
HMGN4-201ENST00000377575 UBE3CQ15386 1083 aa20.31■□□□□ 0.84
HMGN4-201ENST00000377575 LCORLQ8N3X6 602 aa20.31■□□□□ 0.84
HMGN4-201ENST00000377575 PROCA1Q8NCQ7 364 aaPredicted RBP20.31■□□□□ 0.84
HMGN4-201ENST00000377575 MBD4O95243 580 aa20.3■□□□□ 0.84
HMGN4-201ENST00000377575 POLR3DP05423 398 aaPredicted RBP20.3■□□□□ 0.84
HMGN4-201ENST00000377575 LACTBP83111 547 aaPredicted RBP20.3■□□□□ 0.84
HMGN4-201ENST00000377575 SPP2Q13103 211 aa20.3■□□□□ 0.84
HMGN4-201ENST00000377575 AGTPBP1Q9UPW5 1226 aa20.3■□□□□ 0.84
HMGN4-201ENST00000377575 HTTP42858 3142 aa20.3■□□□□ 0.84
HMGN4-201ENST00000377575 ERC2O15083 957 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 GDF11O95390 407 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 HDAC1Q13547 482 aaPredicted RBP20.29■□□□□ 0.84
HMGN4-201ENST00000377575 TSHZ3Q63HK5 1081 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 C17orf99Q6UX52 265 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 SDR42E1Q8WUS8 393 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 GCC1Q96CN9 775 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 ARMT1Q9H993 441 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms