RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 SEC62Q99442 399 aaKnown RBP27.22■■□□□ 1.95
YIF1A-202ENST00000376899 CSADQ9Y600 493 aa27.22■■□□□ 1.95
YIF1A-202ENST00000376899 SNCAIPQ9Y6H5 919 aa27.22■■□□□ 1.95
YIF1A-202ENST00000376899 SLC4A4Q9Y6R1 1079 aa27.22■■□□□ 1.95
YIF1A-202ENST00000376899 AOC2O75106 756 aa27.21■■□□□ 1.95
YIF1A-202ENST00000376899 GRM1Q13255 1194 aa27.21■■□□□ 1.95
YIF1A-202ENST00000376899 FOXP4Q8IVH2 680 aaPredicted RBP27.21■■□□□ 1.95
YIF1A-202ENST00000376899 EHD4Q9H223 541 aa27.21■■□□□ 1.95
YIF1A-202ENST00000376899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.21■■□□□ 1.95
YIF1A-202ENST00000376899 ATAD5Q96QE3 1844 aa27.2■■□□□ 1.95
YIF1A-202ENST00000376899 GNAT2P19087 354 aa27.2■■□□□ 1.94
YIF1A-202ENST00000376899 SPRYD7Q5W111 196 aa27.2■■□□□ 1.94
YIF1A-202ENST00000376899 TTC6Q86TZ1 520 aa27.2■■□□□ 1.94
YIF1A-202ENST00000376899 DNAJC18Q9H819 358 aa27.2■■□□□ 1.94
YIF1A-202ENST00000376899 HELLSQ9NRZ9 838 aa27.2■■□□□ 1.94
YIF1A-202ENST00000376899 MCM9Q9NXL9 1143 aa27.2■■□□□ 1.94
YIF1A-202ENST00000376899 FAM196BA6NMK8 535 aa27.19■■□□□ 1.94
YIF1A-202ENST00000376899 ZBTB48P10074 688 aaPredicted RBP27.19■■□□□ 1.94
YIF1A-202ENST00000376899 SDSP20132 328 aa27.19■■□□□ 1.94
YIF1A-202ENST00000376899 GIMAP6Q6P9H5 292 aa27.19■■□□□ 1.94
YIF1A-202ENST00000376899 ZKSCAN4Q969J2 545 aaPredicted RBP27.19■■□□□ 1.94
YIF1A-202ENST00000376899 WNK4Q96J92 1243 aa27.19■■□□□ 1.94
YIF1A-202ENST00000376899 ELP3Q9H9T3 547 aa27.19■■□□□ 1.94
YIF1A-202ENST00000376899 GSG1L2A8MUP6 293 aa27.18■■□□□ 1.94
YIF1A-202ENST00000376899 ZIC5Q96T25 663 aa27.18■■□□□ 1.94
YIF1A-202ENST00000376899 A0A0D9SFI3 127 aa27.17■■□□□ 1.94
YIF1A-202ENST00000376899 SPDYE5A6NIY4 337 aa27.17■■□□□ 1.94
YIF1A-202ENST00000376899 CTNND1O60716 968 aaKnown RBP27.17■■□□□ 1.94
YIF1A-202ENST00000376899 GJA5P36382 358 aa27.17■■□□□ 1.94
YIF1A-202ENST00000376899 PLCD1P51178 756 aa27.17■■□□□ 1.94
YIF1A-202ENST00000376899 NMIQ13287 307 aaPredicted RBP27.17■■□□□ 1.94
YIF1A-202ENST00000376899 FAM227BQ96M60 508 aa27.17■■□□□ 1.94
YIF1A-202ENST00000376899 HIP1O00291 1037 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 POLR3DP05423 398 aaPredicted RBP27.16■■□□□ 1.94
YIF1A-202ENST00000376899 GABPAQ06546 454 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 SLC4A8Q2Y0W8 1093 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 ERO1BQ86YB8 467 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 SCYL3Q8IZE3 742 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 CRACR2BQ8N4Y2 399 aaPredicted RBP27.16■■□□□ 1.94
YIF1A-202ENST00000376899 OPTNQ96CV9 577 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 DDRGK1Q96HY6 314 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 EPB41L4AQ9HCS5 686 aaPredicted RBP27.16■■□□□ 1.94
YIF1A-202ENST00000376899 SERPINB13Q9UIV8 391 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 TAOK2Q9UL54 1235 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 PHIPQ8WWQ0 1821 aa27.16■■□□□ 1.94
YIF1A-202ENST00000376899 KIF23Q02241 960 aaPredicted RBP27.15■■□□□ 1.94
YIF1A-202ENST00000376899 MCMDC2Q4G0Z9 681 aa27.15■■□□□ 1.94
YIF1A-202ENST00000376899 SKAP1Q86WV1 359 aa27.15■■□□□ 1.94
YIF1A-202ENST00000376899 PATL2C9JE40 543 aaKnown RBP27.14■■□□□ 1.94
YIF1A-202ENST00000376899 CYP2D6P10635 497 aa27.14■■□□□ 1.94
YIF1A-202ENST00000376899 CCDC129Q6ZRS4 1044 aa27.14■■□□□ 1.94
YIF1A-202ENST00000376899 REM2Q8IYK8 340 aaPredicted RBP27.14■■□□□ 1.94
YIF1A-202ENST00000376899 CNKSR2Q8WXI2 1034 aa27.14■■□□□ 1.94
YIF1A-202ENST00000376899 TRIM34Q9BYJ4 488 aa27.14■■□□□ 1.94
YIF1A-202ENST00000376899 ARPP21Q9UBL0 812 aaPredicted RBP27.14■■□□□ 1.94
YIF1A-202ENST00000376899 USP17L12C9JPN9 530 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 USP17L21D6R901 530 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 CAP2P40123 477 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 EVX2Q03828 476 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 RRP1BQ14684 758 aaKnown RBP27.13■■□□□ 1.93
YIF1A-202ENST00000376899 SBK1Q52WX2 424 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 C12orf60Q5U649 245 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 TATDN1Q6P1N9 297 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 CTR9Q6PD62 1173 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 DIAPH3Q9NSV4 1193 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 MYH8P13535 1937 aa27.13■■□□□ 1.93
YIF1A-202ENST00000376899 FOXP2O15409 715 aa27.12■■□□□ 1.93
YIF1A-202ENST00000376899 MAP2K1Q02750 393 aaPredicted RBP27.12■■□□□ 1.93
YIF1A-202ENST00000376899 PPATQ06203 517 aa27.12■■□□□ 1.93
YIF1A-202ENST00000376899 MKRN3Q13064 507 aaKnown RBP27.12■■□□□ 1.93
YIF1A-202ENST00000376899 AMOTL1Q8IY63 956 aa27.12■■□□□ 1.93
YIF1A-202ENST00000376899 OTUD5Q96G74 571 aa27.12■■□□□ 1.93
YIF1A-202ENST00000376899 WBP1LQ9NX94 342 aa27.12■■□□□ 1.93
YIF1A-202ENST00000376899 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.12■■□□□ 1.93
YIF1A-202ENST00000376899 PPIL2Q13356 520 aa27.11■■□□□ 1.93
YIF1A-202ENST00000376899 ZNF589Q86UQ0 364 aaPredicted RBP27.11■■□□□ 1.93
YIF1A-202ENST00000376899 IFNL3Q8IZI9 196 aa27.11■■□□□ 1.93
YIF1A-202ENST00000376899 CCDC171Q6TFL3 1326 aa27.11■■□□□ 1.93
YIF1A-202ENST00000376899 MANSC4A6NHS7 340 aaPredicted RBP27.1■■□□□ 1.93
YIF1A-202ENST00000376899 PTPRAP18433 802 aa27.1■■□□□ 1.93
YIF1A-202ENST00000376899 SHMT1P34896 483 aa27.1■■□□□ 1.93
YIF1A-202ENST00000376899 PICK1Q9NRD5 415 aa27.1■■□□□ 1.93
YIF1A-202ENST00000376899 GINM1Q9NU53 330 aa27.1■■□□□ 1.93
YIF1A-202ENST00000376899 PTPRFP10586 1907 aa27.1■■□□□ 1.93
YIF1A-202ENST00000376899 ROBO3Q96MS0 1386 aa27.09■■□□□ 1.93
YIF1A-202ENST00000376899 CYP2D7A0A087X1C5 515 aa27.09■■□□□ 1.93
YIF1A-202ENST00000376899 NACAP1Q9BZK3 213 aa27.09■■□□□ 1.93
YIF1A-202ENST00000376899 SWAP70Q9UH65 585 aa27.09■■□□□ 1.93
YIF1A-202ENST00000376899 APPP05067 770 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 TM4SF4P48230 202 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 TDO2P48775 406 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 SREBF2Q12772 1141 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 BMP2KLQ5H9B9 411 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 VPS53Q5VIR6 699 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 CWC27Q6UX04 472 aaKnown RBP27.08■■□□□ 1.93
YIF1A-202ENST00000376899 MS4A4AQ96JQ5 239 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 KCNH4Q9UQ05 1017 aa27.08■■□□□ 1.93
YIF1A-202ENST00000376899 TESPA1A2RU30 521 aaPredicted RBP27.07■■□□□ 1.92
YIF1A-202ENST00000376899 SMIM22K7EJ46 135 aa27.07■■□□□ 1.92
YIF1A-202ENST00000376899 IRF6O14896 467 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms