RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SPP2Q13103 211 aa16.24■□□□□ 0.19
CLCN6-205ENST00000376492 RRP1BQ14684 758 aaKnown RBP16.24■□□□□ 0.19
CLCN6-205ENST00000376492 NECAB2Q7Z6G3 386 aa16.24■□□□□ 0.19
CLCN6-205ENST00000376492 SLF2Q8IX21 1173 aa16.24■□□□□ 0.19
CLCN6-205ENST00000376492 PROCA1Q8NCQ7 364 aaPredicted RBP16.24■□□□□ 0.19
CLCN6-205ENST00000376492 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
CLCN6-205ENST00000376492 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
CLCN6-205ENST00000376492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.24■□□□□ 0.19
CLCN6-205ENST00000376492 A0A0C4DFX4 3053 aa16.24■□□□□ 0.19
CLCN6-205ENST00000376492 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 ZBTB22O15209 634 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 TBC1D12O60347 775 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 HMGCRP04035 888 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 PI16Q6UXB8 463 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 MEIS3Q99687 375 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 GDF15Q99988 308 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLCN6-205ENST00000376492 COPRSQ9NQ92 184 aa16.23■□□□□ 0.19
CLCN6-205ENST00000376492 MNX1P50219 401 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-205ENST00000376492 TFCP2Q12800 502 aa16.22■□□□□ 0.19
CLCN6-205ENST00000376492 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-205ENST00000376492 ZNF280CQ8ND82 737 aa16.22■□□□□ 0.19
CLCN6-205ENST00000376492 XAGE2Q96GT9 111 aa16.22■□□□□ 0.19
CLCN6-205ENST00000376492 API5Q9BZZ5 524 aaKnown RBP16.22■□□□□ 0.19
CLCN6-205ENST00000376492 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
CLCN6-205ENST00000376492 GJD2Q9UKL4 321 aa16.22■□□□□ 0.19
CLCN6-205ENST00000376492 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.19
CLCN6-205ENST00000376492 PEX10O60683 326 aa16.21■□□□□ 0.19
CLCN6-205ENST00000376492 SYN1P17600 705 aa16.21■□□□□ 0.19
CLCN6-205ENST00000376492 CAPN2P17655 700 aa16.21■□□□□ 0.19
CLCN6-205ENST00000376492 GCLCP48506 637 aaPredicted RBP16.21■□□□□ 0.19
CLCN6-205ENST00000376492 TBC1D9Q6ZT07 1266 aa16.21■□□□□ 0.19
CLCN6-205ENST00000376492 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
CLCN6-205ENST00000376492 TRIB2Q92519 343 aa16.21■□□□□ 0.19
CLCN6-205ENST00000376492 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
CLCN6-205ENST00000376492 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
CLCN6-205ENST00000376492 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
CLCN6-205ENST00000376492 CAP2P40123 477 aa16.2■□□□□ 0.18
CLCN6-205ENST00000376492 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
CLCN6-205ENST00000376492 ANKLE1Q8NAG6 615 aa16.2■□□□□ 0.18
CLCN6-205ENST00000376492 HMG20BQ9P0W2 317 aa16.2■□□□□ 0.18
CLCN6-205ENST00000376492 RPTORQ8N122 1335 aa16.19■□□□□ 0.18
CLCN6-205ENST00000376492 COL2A1P02458 1487 aaPredicted RBP16.19■□□□□ 0.18
CLCN6-205ENST00000376492 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
CLCN6-205ENST00000376492 BCAR3O75815 825 aa16.19■□□□□ 0.18
CLCN6-205ENST00000376492 BMP8BP34820 402 aa16.19■□□□□ 0.18
CLCN6-205ENST00000376492 Q7L0L9 218 aa16.19■□□□□ 0.18
CLCN6-205ENST00000376492 NSUN4Q96CB9 384 aaKnown RBP16.19■□□□□ 0.18
CLCN6-205ENST00000376492 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
CLCN6-205ENST00000376492 HMX1Q9NP08 348 aaPredicted RBP16.19■□□□□ 0.18
CLCN6-205ENST00000376492 DOCK3Q8IZD9 2030 aa16.19■□□□□ 0.18
CLCN6-205ENST00000376492 USP17L5A8MUK1 530 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 CYP2B6P20813 491 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 MAGEA10P43363 369 aaPredicted RBP16.18■□□□□ 0.18
CLCN6-205ENST00000376492 PABPC4Q13310 644 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLCN6-205ENST00000376492 MTMR2Q13614 643 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 SH3D19Q5HYK7 790 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 DEFB123Q8N688 67 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 SPATA5Q8NB90 893 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 NEUROD6Q96NK8 337 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 CUL9Q8IWT3 2517 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 PFASO15067 1338 aa16.18■□□□□ 0.18
CLCN6-205ENST00000376492 DDX60LQ5H9U9 1706 aaKnown RBP16.17■□□□□ 0.18
CLCN6-205ENST00000376492 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
CLCN6-205ENST00000376492 JAG1P78504 1218 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
CLCN6-205ENST00000376492 MAP3K21Q5TCX8 1036 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 TEX11Q8IYF3 940 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 SH3RF3Q8TEJ3 882 aaPredicted RBP16.17■□□□□ 0.18
CLCN6-205ENST00000376492 TBC1D2Q9BYX2 928 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 TXNRD2Q9NNW7 524 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 MORF4L1Q9UBU8 362 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 OGDHLQ9ULD0 1010 aa16.17■□□□□ 0.18
CLCN6-205ENST00000376492 IRX3P78415 501 aaPredicted RBP16.16■□□□□ 0.18
CLCN6-205ENST00000376492 GSTO1P78417 241 aa16.16■□□□□ 0.18
CLCN6-205ENST00000376492 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
CLCN6-205ENST00000376492 PLXNB2O15031 1838 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
CLCN6-205ENST00000376492 LDHCP07864 332 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 TRIM27P14373 513 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 MCAMP43121 646 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
CLCN6-205ENST00000376492 DNAJC18Q9H819 358 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 AS3MTQ9HBK9 375 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
CLCN6-205ENST00000376492 HDAC5Q9UQL6 1122 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
CLCN6-205ENST00000376492 ARID4AP29374 1257 aaPredicted RBP16.14■□□□□ 0.17
CLCN6-205ENST00000376492 BACE1P56817 501 aa16.14■□□□□ 0.17
CLCN6-205ENST00000376492 HERVK_113P62684 666 aa16.14■□□□□ 0.17
CLCN6-205ENST00000376492 MTX1Q13505 466 aa16.14■□□□□ 0.17
CLCN6-205ENST00000376492 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
CLCN6-205ENST00000376492 GORABQ5T7V8 394 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms