RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 AMOTL1Q8IY63 956 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 KLRG1Q96E93 195 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 HHIPL1Q96JK4 782 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 EPB41L4AQ9HCS5 686 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-202ENST00000374676 ARPP21Q9UBL0 812 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-202ENST00000374676 ANGEL1Q9UNK9 670 aaKnown RBP13.59□□□□□ -0.23
HSPG2-202ENST00000374676 TLL2Q9Y6L7 1015 aa13.59□□□□□ -0.23
HSPG2-202ENST00000374676 UBE2Q2LH0YL09 131 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 PRKG1Q13976 671 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 MOB2Q70IA6 237 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 NAPBQ9H115 298 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 IL25Q9H293 177 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
HSPG2-202ENST00000374676 SERPINB13Q9UIV8 391 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
HSPG2-202ENST00000374676 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 FGAP02671 866 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 CYP2D6P10635 497 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 TDO2P48775 406 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 HUNKP57058 714 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 GABPAQ06546 454 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 ANKRD13AQ8IZ07 590 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.57□□□□□ -0.24
HSPG2-202ENST00000374676 ESYT1Q9BSJ8 1104 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 ABT1Q9ULW3 272 aaKnown RBP13.57□□□□□ -0.24
HSPG2-202ENST00000374676 FZD1Q9UP38 647 aa13.57□□□□□ -0.24
HSPG2-202ENST00000374676 DEFB115Q30KQ5 88 aa13.56□□□□□ -0.24
HSPG2-202ENST00000374676 TATDN1Q6P1N9 297 aa13.56□□□□□ -0.24
HSPG2-202ENST00000374676 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-202ENST00000374676 CRACR2BQ8N4Y2 399 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-202ENST00000374676 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
HSPG2-202ENST00000374676 DNAJC18Q9H819 358 aa13.56□□□□□ -0.24
HSPG2-202ENST00000374676 MYH8P13535 1937 aa13.56□□□□□ -0.24
HSPG2-202ENST00000374676 OTOFQ9HC10 1997 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 CYP2D7A0A087X1C5 515 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 RASSF10A6NK89 507 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 MINDY4BA8MYZ0 360 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 CTNND1O60716 968 aaKnown RBP13.55□□□□□ -0.24
HSPG2-202ENST00000374676 SLURP2P0DP57 97 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 NOL9Q5SY16 702 aaKnown RBP13.55□□□□□ -0.24
HSPG2-202ENST00000374676 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 WRNIP1Q96S55 665 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 GINM1Q9NU53 330 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 ANAPC4Q9UJX5 808 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 LAMB1P07942 1786 aa13.55□□□□□ -0.24
HSPG2-202ENST00000374676 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 INPP5BP32019 993 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 SHMT1P34896 483 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 EVX2Q03828 476 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 SLC4A8Q2Y0W8 1093 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 C16orf86Q6ZW13 317 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 ZKSCAN4Q969J2 545 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-202ENST00000374676 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 CTNNA3Q9UI47 895 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 CSADQ9Y600 493 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 ROBO3Q96MS0 1386 aa13.54□□□□□ -0.24
HSPG2-202ENST00000374676 SMIM22K7EJ46 135 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
HSPG2-202ENST00000374676 CAP2P40123 477 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 CDK8P49336 464 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 PTH1RQ03431 593 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 PPARAQ07869 468 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 VGLL4Q14135 290 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 RRP1BQ14684 758 aaKnown RBP13.53□□□□□ -0.24
HSPG2-202ENST00000374676 KIAA1211Q6ZU35 1233 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 DYNLL2Q96FJ2 89 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 CLMNQ96JQ2 1002 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 LSG1Q9H089 658 aaKnown RBP13.53□□□□□ -0.24
HSPG2-202ENST00000374676 SNCAIPQ9Y6H5 919 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 ATAD5Q96QE3 1844 aa13.53□□□□□ -0.24
HSPG2-202ENST00000374676 FGRP09769 529 aa13.52□□□□□ -0.25
HSPG2-202ENST00000374676 ZNF157P51786 506 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-202ENST00000374676 HTRA3P83110 453 aa13.52□□□□□ -0.25
HSPG2-202ENST00000374676 CERKLQ49MI3 558 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-202ENST00000374676 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.25
HSPG2-202ENST00000374676 CCDC17Q96LX7 622 aa13.52□□□□□ -0.25
HSPG2-202ENST00000374676 ZNF287Q9HBT7 754 aa13.52□□□□□ -0.25
HSPG2-202ENST00000374676 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-202ENST00000374676 DOCK1Q14185 1865 aa13.52□□□□□ -0.25
HSPG2-202ENST00000374676 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 SPDYE5A6NIY4 337 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 ZNF213O14771 459 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 ECE1P42892 770 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 PDE4BQ07343 736 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 ERO1BQ86YB8 467 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 SLC44A5Q8NCS7 719 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 ELP3Q9H9T3 547 aa13.51□□□□□ -0.25
HSPG2-202ENST00000374676 ASNSP08243 561 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 SLC10A3P09131 477 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-202ENST00000374676 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
HSPG2-202ENST00000374676 PTPRAP18433 802 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 CTDSPL2Q05D32 466 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms