RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 AMOTL1Q8IY63 956 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 ZNF341Q9BYN7 854 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 FZD1Q9UP38 647 aa17.96■□□□□ 0.47
HSPG2-201ENST00000374673 ZMYM6O95789 1325 aa17.96■□□□□ 0.46
HSPG2-201ENST00000374673 ATAD5Q96QE3 1844 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 UNCXA6NJT0 531 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 USP17L12C9JPN9 530 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 USP17L21D6R901 530 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 TDO2P48775 406 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 PLCD1P51178 756 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 ALX1Q15699 326 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 C12orf60Q5U649 245 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 MOB2Q70IA6 237 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.95■□□□□ 0.46
HSPG2-201ENST00000374673 KLRG1Q96E93 195 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 NAPBQ9H115 298 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 SERPINB13Q9UIV8 391 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 ZNF112Q9UJU3 913 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 TAOK2Q9UL54 1235 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 DOCK1Q14185 1865 aa17.95■□□□□ 0.46
HSPG2-201ENST00000374673 CYP2D6P10635 497 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 LDLRAD1Q5T700 205 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 CASC1Q6TDU7 716 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 HHIPL1Q96JK4 782 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 ESYT1Q9BSJ8 1104 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 DSCC1Q9BVC3 393 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 DNAJC18Q9H819 358 aa17.94■□□□□ 0.46
HSPG2-201ENST00000374673 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
HSPG2-201ENST00000374673 ABT1Q9ULW3 272 aaKnown RBP17.94■□□□□ 0.46
HSPG2-201ENST00000374673 ROBO3Q96MS0 1386 aa17.93■□□□□ 0.46
HSPG2-201ENST00000374673 UBE2Q2LH0YL09 131 aa17.93■□□□□ 0.46
HSPG2-201ENST00000374673 SLURP2P0DP57 97 aa17.93■□□□□ 0.46
HSPG2-201ENST00000374673 HUNKP57058 714 aa17.93■□□□□ 0.46
HSPG2-201ENST00000374673 GABPAQ06546 454 aa17.93■□□□□ 0.46
HSPG2-201ENST00000374673 ANKRD13AQ8IZ07 590 aa17.93■□□□□ 0.46
HSPG2-201ENST00000374673 CRACR2BQ8N4Y2 399 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-201ENST00000374673 CYP2D7A0A087X1C5 515 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 RASSF10A6NK89 507 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 FAM196BA6NMK8 535 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 PHF20L1A8MW92 1017 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 MAP3K9P80192 1104 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 EVX2Q03828 476 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 WRNIP1Q96S55 665 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 TRIM34Q9BYJ4 488 aa17.92■□□□□ 0.46
HSPG2-201ENST00000374673 FGAP02671 866 aa17.91■□□□□ 0.46
HSPG2-201ENST00000374673 NOL9Q5SY16 702 aaKnown RBP17.91■□□□□ 0.46
HSPG2-201ENST00000374673 TATDN1Q6P1N9 297 aa17.91■□□□□ 0.46
HSPG2-201ENST00000374673 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.91■□□□□ 0.46
HSPG2-201ENST00000374673 SWAP70Q9UH65 585 aa17.91■□□□□ 0.46
HSPG2-201ENST00000374673 MINDY4BA8MYZ0 360 aa17.9■□□□□ 0.46
HSPG2-201ENST00000374673 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
HSPG2-201ENST00000374673 INPP5BP32019 993 aa17.9■□□□□ 0.46
HSPG2-201ENST00000374673 PPARAQ07869 468 aa17.9■□□□□ 0.46
HSPG2-201ENST00000374673 VGLL4Q14135 290 aa17.9■□□□□ 0.46
HSPG2-201ENST00000374673 C16orf86Q6ZW13 317 aa17.9■□□□□ 0.46
HSPG2-201ENST00000374673 CSADQ9Y600 493 aa17.9■□□□□ 0.46
HSPG2-201ENST00000374673 CTNND1O60716 968 aaKnown RBP17.89■□□□□ 0.45
HSPG2-201ENST00000374673 SHMT1P34896 483 aa17.89■□□□□ 0.45
HSPG2-201ENST00000374673 HTRA3P83110 453 aa17.89■□□□□ 0.45
HSPG2-201ENST00000374673 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
HSPG2-201ENST00000374673 RGMBQ6NW40 437 aa17.89■□□□□ 0.45
HSPG2-201ENST00000374673 DYNLL2Q96FJ2 89 aa17.89■□□□□ 0.45
HSPG2-201ENST00000374673 ANAPC4Q9UJX5 808 aa17.89■□□□□ 0.45
HSPG2-201ENST00000374673 SNCAIPQ9Y6H5 919 aa17.89■□□□□ 0.45
HSPG2-201ENST00000374673 PHIPQ8WWQ0 1821 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 CAP2P40123 477 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 CDK8P49336 464 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 PTH1RQ03431 593 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 RRP1BQ14684 758 aaKnown RBP17.88■□□□□ 0.45
HSPG2-201ENST00000374673 KIAA1211Q6ZU35 1233 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 SCYL3Q8IZE3 742 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 ZKSCAN4Q969J2 545 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-201ENST00000374673 CLMNQ96JQ2 1002 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 LSG1Q9H089 658 aaKnown RBP17.88■□□□□ 0.45
HSPG2-201ENST00000374673 CTNNA3Q9UI47 895 aa17.88■□□□□ 0.45
HSPG2-201ENST00000374673 SLC3A2P08195 630 aaKnown RBP17.87■□□□□ 0.45
HSPG2-201ENST00000374673 SLC44A5Q8NCS7 719 aa17.87■□□□□ 0.45
HSPG2-201ENST00000374673 MAP4K1Q92918 833 aa17.87■□□□□ 0.45
HSPG2-201ENST00000374673 GINM1Q9NU53 330 aa17.87■□□□□ 0.45
HSPG2-201ENST00000374673 GREB1LQ9C091 1923 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-201ENST00000374673 SLC10A3P09131 477 aa17.86■□□□□ 0.45
HSPG2-201ENST00000374673 ZNF157P51786 506 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-201ENST00000374673 CERKLQ49MI3 558 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-201ENST00000374673 RASAL3Q86YV0 1011 aa17.86■□□□□ 0.45
HSPG2-201ENST00000374673 SLC10A4Q96EP9 437 aa17.86■□□□□ 0.45
HSPG2-201ENST00000374673 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
HSPG2-201ENST00000374673 ZNF287Q9HBT7 754 aa17.86■□□□□ 0.45
HSPG2-201ENST00000374673 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
HSPG2-201ENST00000374673 U3KPZ7 1027 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-201ENST00000374673 THSD7BQ9C0I4 1608 aa17.86■□□□□ 0.45
HSPG2-201ENST00000374673 SPDYE5A6NIY4 337 aa17.85■□□□□ 0.45
HSPG2-201ENST00000374673 FAM155AB1AL88 458 aaPredicted RBP17.85■□□□□ 0.45
HSPG2-201ENST00000374673 ZNF213O14771 459 aa17.85■□□□□ 0.45
HSPG2-201ENST00000374673 ECE1P42892 770 aa17.85■□□□□ 0.45
HSPG2-201ENST00000374673 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
HSPG2-201ENST00000374673 PDE4BQ07343 736 aa17.85■□□□□ 0.45
HSPG2-201ENST00000374673 IMMTQ16891 758 aaKnown RBP17.85■□□□□ 0.45
HSPG2-201ENST00000374673 CCDC102AQ96A19 550 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms