RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 MFSD6Q6ZSS7 791 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
C9orf43-202ENST00000374165 FAM196BA6NMK8 535 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 EPHX2P34913 555 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 KRT32Q14532 448 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 RASA3Q14644 834 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 FKBP1CQ5VVH2 108 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 FAM151AQ8WW52 585 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 TM6SF1Q9BZW5 370 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 PGAP2Q9UHJ9 254 aa20.78■□□□□ 0.92
C9orf43-202ENST00000374165 WDR90Q96KV7 1748 aa20.77■□□□□ 0.92
C9orf43-202ENST00000374165 FGRP09769 529 aa20.77■□□□□ 0.92
C9orf43-202ENST00000374165 RRP12Q5JTH9 1297 aaKnown RBP20.77■□□□□ 0.92
C9orf43-202ENST00000374165 DLK2Q6UY11 383 aa20.77■□□□□ 0.92
C9orf43-202ENST00000374165 RUFY3Q7L099 469 aa20.77■□□□□ 0.92
C9orf43-202ENST00000374165 TAF1DQ9H5J8 278 aaPredicted RBP20.77■□□□□ 0.92
C9orf43-202ENST00000374165 GABPAQ06546 454 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 RABEP1Q15276 862 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 CYB5R4Q7L1T6 521 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 FAM83AQ86UY5 434 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 LRRC2Q9BYS8 371 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 DNAJC18Q9H819 358 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 TOMM22Q9NS69 142 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 ZSWIM5Q9P217 1185 aa20.77■□□□□ 0.91
C9orf43-202ENST00000374165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.77■□□□□ 0.91
C9orf43-202ENST00000374165 ATRNL1Q5VV63 1379 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 ROBO3Q96MS0 1386 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 PRAMEF18Q5VWM3 479 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 BLOC1S2Q6QNY1 142 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 TTC6Q86TZ1 520 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 MB21D2Q8IYB1 491 aaPredicted RBP20.76■□□□□ 0.91
C9orf43-202ENST00000374165 NCOA7Q8NI08 942 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 CSRNP1Q96S65 589 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 LARP6Q9BRS8 491 aaKnown RBP20.76■□□□□ 0.91
C9orf43-202ENST00000374165 DEFB129Q9H1M3 183 aa20.76■□□□□ 0.91
C9orf43-202ENST00000374165 SLKQ9H2G2 1235 aaPredicted RBP20.76■□□□□ 0.91
C9orf43-202ENST00000374165 DHX36Q9H2U1 1008 aaKnown RBP20.76■□□□□ 0.91
C9orf43-202ENST00000374165 KDM4AO75164 1064 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 ANTXR2P58335 489 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 ZNF526Q8TF50 670 aaPredicted RBP20.75■□□□□ 0.91
C9orf43-202ENST00000374165 TEPSINQ96N21 525 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 SERPINB13Q9UIV8 391 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 POTEIP0CG38 1075 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 POTEJP0CG39 1038 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 RPS6KB1P23443 525 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 PSMA5P28066 241 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 CDK8P49336 464 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 EXOSC10Q01780 885 aaKnown RBP20.75■□□□□ 0.91
C9orf43-202ENST00000374165 C16orf86Q6ZW13 317 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 TTC14Q96N46 770 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 GPHNQ9NQX3 736 aaPredicted RBP20.75■□□□□ 0.91
C9orf43-202ENST00000374165 PI4KBQ9UBF8 816 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 CYP46A1Q9Y6A2 500 aa20.75■□□□□ 0.91
C9orf43-202ENST00000374165 DHX32Q7L7V1 743 aaKnown RBP20.74■□□□□ 0.91
C9orf43-202ENST00000374165 SPRYD3Q8NCJ5 442 aa20.74■□□□□ 0.91
C9orf43-202ENST00000374165 RRAGCQ9HB90 399 aa20.74■□□□□ 0.91
C9orf43-202ENST00000374165 MYH8P13535 1937 aa20.74■□□□□ 0.91
C9orf43-202ENST00000374165 TRDNQ13061 729 aa20.73■□□□□ 0.91
C9orf43-202ENST00000374165 FAM47AQ5JRC9 791 aa20.73■□□□□ 0.91
C9orf43-202ENST00000374165 USP50Q70EL3 339 aaPredicted RBP20.73■□□□□ 0.91
C9orf43-202ENST00000374165 RALYLQ86SE5 291 aaKnown RBP20.73■□□□□ 0.91
C9orf43-202ENST00000374165 RNF41Q9H4P4 317 aaPredicted RBP20.73■□□□□ 0.91
C9orf43-202ENST00000374165 IQCA1LA6NCM1 817 aa20.73■□□□□ 0.91
C9orf43-202ENST00000374165 RANBP6O60518 1105 aaKnown RBP20.73■□□□□ 0.91
C9orf43-202ENST00000374165 HLA-DOAP06340 250 aa20.73■□□□□ 0.91
C9orf43-202ENST00000374165 PDE4BQ07343 736 aa20.73■□□□□ 0.91
C9orf43-202ENST00000374165 EAPPQ56P03 285 aaPredicted RBP20.73■□□□□ 0.91
C9orf43-202ENST00000374165 ZKSCAN3Q9BRR0 538 aa20.73■□□□□ 0.91
C9orf43-202ENST00000374165 ORC4O43929 436 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 SLC3A2P08195 630 aaKnown RBP20.72■□□□□ 0.91
C9orf43-202ENST00000374165 RASA1P20936 1047 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 SHMT1P34896 483 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 TNFAIP1Q13829 316 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 MIGA2Q7L4E1 593 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 EHD4Q9H223 541 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 CNNM2Q9H8M5 875 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 MKNK2Q9HBH9 465 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 NMRK2Q9NPI5 230 aa20.72■□□□□ 0.91
C9orf43-202ENST00000374165 COL2A1P02458 1487 aaPredicted RBP20.72■□□□□ 0.91
C9orf43-202ENST00000374165 TNNI2P48788 182 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 AK2P54819 239 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 METTL16Q86W50 562 aaKnown RBP20.71■□□□□ 0.91
C9orf43-202ENST00000374165 KRT23Q9C075 422 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 PDRG1Q9NUG6 133 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 PRC1O43663 620 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 NMT2O60551 498 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
C9orf43-202ENST00000374165 MCM5P33992 734 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 NBR1Q14596 966 aa20.71■□□□□ 0.91
C9orf43-202ENST00000374165 SHROOM1Q2M3G4 852 aaPredicted RBP20.71■□□□□ 0.91
C9orf43-202ENST00000374165 NBPF12Q5TAG4 269 aaPredicted RBP20.71■□□□□ 0.91
C9orf43-202ENST00000374165 NOL8Q76FK4 1167 aaKnown RBP20.71■□□□□ 0.91
C9orf43-202ENST00000374165 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
C9orf43-202ENST00000374165 PCP11498 1178 aaKnown RBP20.7■□□□□ 0.9
C9orf43-202ENST00000374165 TOB2Q14106 344 aaPredicted RBP20.7■□□□□ 0.9
C9orf43-202ENST00000374165 RRP1BQ14684 758 aaKnown RBP20.7■□□□□ 0.9
C9orf43-202ENST00000374165 Q6ZUG5 572 aa20.7■□□□□ 0.9
C9orf43-202ENST00000374165 APOBEC3FQ8IUX4 373 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms