RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ERICH2A1L162 156 aa23.8■■□□□ 1.4
VEGFA-204ENST00000372064 ZPR1O75312 459 aa23.8■■□□□ 1.4
VEGFA-204ENST00000372064 RTN1Q16799 776 aa23.8■■□□□ 1.4
VEGFA-204ENST00000372064 FBXO33Q7Z6M2 555 aa23.8■■□□□ 1.4
VEGFA-204ENST00000372064 UBAP1LF5GYI3 381 aa23.8■■□□□ 1.4
VEGFA-204ENST00000372064 RBM6P78332 1123 aaKnown RBP23.8■■□□□ 1.4
VEGFA-204ENST00000372064 FBXW7Q969H0 707 aa23.8■■□□□ 1.4
VEGFA-204ENST00000372064 SLC3A2P08195 630 aaKnown RBP23.79■■□□□ 1.4
VEGFA-204ENST00000372064 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-204ENST00000372064 CCDC82Q8N4S0 544 aa23.79■■□□□ 1.4
VEGFA-204ENST00000372064 CCNL1Q9UK58 526 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-204ENST00000372064 MMP1P03956 469 aa23.79■■□□□ 1.4
VEGFA-204ENST00000372064 SHC4Q6S5L8 630 aa23.79■■□□□ 1.4
VEGFA-204ENST00000372064 CMTR1Q8N1G2 835 aaKnown RBP23.79■■□□□ 1.4
VEGFA-204ENST00000372064 DUOX1Q9NRD9 1551 aa23.79■■□□□ 1.4
VEGFA-204ENST00000372064 CYP2D7A0A087X1C5 515 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 CCDC196A0A1B0GTZ2 297 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 DYNC1I1O14576 645 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 RRP9O43818 475 aaKnown RBP23.78■■□□□ 1.4
VEGFA-204ENST00000372064 SEC23AQ15436 765 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 AOPEPQ8N6M6 819 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 UBAC1Q9BSL1 405 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 TFCP2L1Q9NZI6 479 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 PDS5AQ29RF7 1337 aaKnown RBP23.78■■□□□ 1.4
VEGFA-204ENST00000372064 SEMA3EO15041 775 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 DPCR1Q3MIW9 517 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 CCDC144BQ3MJ40 725 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 NOSTRINQ8IVI9 506 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 CRACR2BQ8N4Y2 399 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-204ENST00000372064 MYRIPQ8NFW9 859 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 NUP133Q8WUM0 1156 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 BRIP1Q9BX63 1249 aa23.78■■□□□ 1.4
VEGFA-204ENST00000372064 RESP18Q5W5W9 173 aa23.77■■□□□ 1.4
VEGFA-204ENST00000372064 TRIM22Q8IYM9 498 aa23.77■■□□□ 1.4
VEGFA-204ENST00000372064 ZNF654Q8IZM8 581 aa23.77■■□□□ 1.4
VEGFA-204ENST00000372064 RTCBQ9Y3I0 505 aaKnown RBP23.77■■□□□ 1.4
VEGFA-204ENST00000372064 LRMPQ12912 555 aa23.77■■□□□ 1.4
VEGFA-204ENST00000372064 ESR2Q92731 530 aa23.77■■□□□ 1.4
VEGFA-204ENST00000372064 NLRP12P59046 1061 aa23.77■■□□□ 1.39
VEGFA-204ENST00000372064 TPTE2Q6XPS3 522 aa23.77■■□□□ 1.39
VEGFA-204ENST00000372064 FANCBQ8NB91 859 aa23.77■■□□□ 1.39
VEGFA-204ENST00000372064 ARHGEF1Q92888 912 aaKnown RBP23.77■■□□□ 1.39
VEGFA-204ENST00000372064 USP21Q9UK80 565 aa23.77■■□□□ 1.39
VEGFA-204ENST00000372064 TNKSO95271 1327 aa23.76■■□□□ 1.39
VEGFA-204ENST00000372064 DEXIO95424 95 aa23.76■■□□□ 1.39
VEGFA-204ENST00000372064 BTAF1O14981 1849 aa23.76■■□□□ 1.39
VEGFA-204ENST00000372064 CUTAO60888 179 aa23.76■■□□□ 1.39
VEGFA-204ENST00000372064 SYKP43405 635 aa23.76■■□□□ 1.39
VEGFA-204ENST00000372064 FOXP1Q9H334 677 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-204ENST00000372064 KCNJ14Q9UNX9 436 aa23.76■■□□□ 1.39
VEGFA-204ENST00000372064 FGRP09769 529 aa23.75■■□□□ 1.39
VEGFA-204ENST00000372064 PPP2R5BQ15173 497 aa23.75■■□□□ 1.39
VEGFA-204ENST00000372064 CACTINQ8WUQ7 758 aaKnown RBP23.75■■□□□ 1.39
VEGFA-204ENST00000372064 NSUN4Q96CB9 384 aaKnown RBP23.75■■□□□ 1.39
VEGFA-204ENST00000372064 BTBD18B2RXH4 712 aa23.75■■□□□ 1.39
VEGFA-204ENST00000372064 HIBADHP31937 336 aaKnown RBP23.75■■□□□ 1.39
VEGFA-204ENST00000372064 ZRSR1Q15695 479 aaKnown RBP23.75■■□□□ 1.39
VEGFA-204ENST00000372064 TUBE1Q9UJT0 475 aa23.75■■□□□ 1.39
VEGFA-204ENST00000372064 PRDM1O75626 825 aa23.74■■□□□ 1.39
VEGFA-204ENST00000372064 PCP11498 1178 aaKnown RBP23.74■■□□□ 1.39
VEGFA-204ENST00000372064 MECOMQ03112 1051 aa23.74■■□□□ 1.39
VEGFA-204ENST00000372064 CHAF1AQ13111 956 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-204ENST00000372064 SAFBQ15424 915 aaKnown RBP eCLIP23.74■■□□□ 1.39
VEGFA-204ENST00000372064 DIS3L2Q8IYB7 885 aaKnown RBP23.74■■□□□ 1.39
VEGFA-204ENST00000372064 DLEC1Q9Y238 1755 aa23.74■■□□□ 1.39
VEGFA-204ENST00000372064 GTF2F1P35269 517 aaKnown RBP eCLIP23.73■■□□□ 1.393e-11■■■■■ 42.3
VEGFA-204ENST00000372064 ANKRD2Q9GZV1 360 aa23.73■■□□□ 1.39
VEGFA-204ENST00000372064 NHSQ6T4R5 1651 aa23.73■■□□□ 1.39
VEGFA-204ENST00000372064 TM4SF1P30408 202 aa23.73■■□□□ 1.39
VEGFA-204ENST00000372064 TOB1P50616 345 aaPredicted RBP23.73■■□□□ 1.39
VEGFA-204ENST00000372064 CLIC6Q96NY7 704 aa23.73■■□□□ 1.39
VEGFA-204ENST00000372064 BAZ2AQ9UIF9 1905 aaKnown RBP23.73■■□□□ 1.39
VEGFA-204ENST00000372064 TXNRD3Q86VQ6 643 aa23.73■■□□□ 1.39
VEGFA-204ENST00000372064 LRRC8AQ8IWT6 810 aa23.73■■□□□ 1.39
VEGFA-204ENST00000372064 ENAHQ8N8S7 591 aaPredicted RBP23.73■■□□□ 1.39
VEGFA-204ENST00000372064 ZBTB22O15209 634 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 NEMFO60524 1076 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 PRDX5P30044 214 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 CTR9Q6PD62 1173 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 ZSCAN10Q96SZ4 725 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-204ENST00000372064 MYH13Q9UKX3 1938 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 BIN1O00499 593 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 EVX2Q03828 476 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 HSP90AA2PQ14568 343 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-204ENST00000372064 RNF26Q9BY78 433 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-204ENST00000372064 AATFQ9NY61 560 aaKnown RBP eCLIP23.72■■□□□ 1.392e-17■■□□□ 11.9
VEGFA-204ENST00000372064 JAG2Q9Y219 1238 aa23.72■■□□□ 1.39
VEGFA-204ENST00000372064 MAST2Q6P0Q8 1798 aa23.71■■□□□ 1.39
VEGFA-204ENST00000372064 USP17L12C9JPN9 530 aa23.71■■□□□ 1.39
VEGFA-204ENST00000372064 USP17L21D6R901 530 aa23.71■■□□□ 1.39
VEGFA-204ENST00000372064 RILPL1Q5EBL4 403 aa23.71■■□□□ 1.39
VEGFA-204ENST00000372064 KRI1Q8N9T8 703 aaKnown RBP23.71■■□□□ 1.39
VEGFA-204ENST00000372064 NPHP1O15259 732 aa23.7■■□□□ 1.39
VEGFA-204ENST00000372064 NCAPHQ15003 741 aa23.7■■□□□ 1.39
VEGFA-204ENST00000372064 SLC51AQ86UW1 340 aa23.7■■□□□ 1.39
VEGFA-204ENST00000372064 ELOA2Q8IYF1 753 aaPredicted RBP23.7■■□□□ 1.39
VEGFA-204ENST00000372064 THSD7AQ9UPZ6 1657 aa23.7■■□□□ 1.38
VEGFA-204ENST00000372064 MYH2Q9UKX2 1941 aa23.7■■□□□ 1.38
VEGFA-204ENST00000372064 IKBKBO14920 756 aa23.69■■□□□ 1.38
VEGFA-204ENST00000372064 NR5A1Q13285 461 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms