RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 C4BP0C0L5 1744 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 PFKFB1P16118 471 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 TFCP2Q12800 502 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 PPP2R5AQ15172 486 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 DBNDD2Q9BQY9 259 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 CFAP45Q9UL16 551 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 ALDH1L1O75891 902 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 NAIF1Q69YI7 327 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 CHADLQ6NUI6 762 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 TOM1L2Q6ZVM7 507 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 FCHSD1Q86WN1 690 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 CCDC24Q8N4L8 307 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 ORAI2Q96SN7 254 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 RTEL1Q9NZ71 1219 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 HDAC6Q9UBN7 1215 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 IKBKBO14920 756 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 PFKFB2O60825 505 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 ZNF18P17022 549 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 MNAT1P51948 309 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 TRIM29Q14134 588 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 SHC4Q6S5L8 630 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 TRMT1LQ7Z2T5 733 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 STAMQ92783 540 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 CDC23Q9UJX2 597 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 MARF1Q9Y4F3 1742 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 TRPM3Q9HCF6 1732 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 SKAP2O75563 359 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 STX17P56962 302 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 TTC39AQ5SRH9 613 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 SLC35F6Q8N357 371 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 RRP36Q96EU6 259 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 SLC24A3Q9HC58 644 aa9.95□□□□□ -0.82
SMARCA1-203ENST00000371123 UBE2Q2LH0YL09 131 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 KCNA6P17658 529 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 MDM2Q00987 491 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 NAA16Q6N069 864 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 ACRBPQ8NEB7 543 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 PRR36Q9H6K5 1346 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 KIF1CO43896 1103 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 IFIT1P09914 478 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 CCNHP51946 323 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 METP08581 1390 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 CARMIL3Q8ND23 1372 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 GOLGA8BA8MQT2 603 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 PDE6BP35913 854 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 LONRF3Q496Y0 759 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 NEK1Q96PY6 1258 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 HPSEQ9Y251 543 aa9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 REXO2Q9Y3B8 237 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-203ENST00000371123 SRGAP2O75044 1071 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 AKAP17AQ02040 695 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 GRIN1Q05586 938 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 ZNF827Q17R98 1081 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 EVI5LQ96CN4 794 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 SUCLG2Q96I99 432 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 SAMSN1Q9NSI8 373 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 A0A1W2PQ27 194 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 A0A1W2PQ64 194 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 A0A1W2PQD8 194 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 EXOSC10Q01780 885 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 TLDC1Q6P9B6 456 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 AFAP1L1Q8TED9 768 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 SNAP23O00161 211 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 PDE2AO00408 941 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 STX10O60499 249 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 SLC3A2P08195 630 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 PDHBP11177 359 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 ERVK-24P63145 666 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 ACTN3Q08043 901 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 DDR1Q08345 913 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 JAKMIP3Q5VZ66 844 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 ANKLE2Q86XL3 938 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 VPS37DQ86XT2 251 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 AIFM3Q96NN9 605 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 PLIN2Q99541 437 aa9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 DDX20Q9UHI6 824 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-203ENST00000371123 MYO5AQ9Y4I1 1855 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 TOP1P11387 765 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 TDO2P48775 406 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 EIF5P55010 431 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 MRPS25P82663 173 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 TTMPQ5BVD1 217 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 MMS19Q96T76 1030 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 SH3GL2Q99962 352 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 CDC25AP30304 524 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 AFMP43652 599 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 SF3A3Q12874 501 aaKnown RBP eCLIP9.92□□□□□ -0.828e-7■■■■■ 27.4
SMARCA1-203ENST00000371123 WLSQ5T9L3 541 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 WDR93Q6P2C0 686 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 PI16Q6UXB8 463 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 HDAC7Q8WUI4 952 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 AGXT2Q9BYV1 514 aa9.92□□□□□ -0.82
SMARCA1-203ENST00000371123 GNL3LQ9NVN8 582 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms