RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
COL9A1-204ENST00000370496 ELP3Q9H9T3 547 aa17.8■□□□□ 0.44
COL9A1-204ENST00000370496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.44
COL9A1-204ENST00000370496 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-204ENST00000370496 ATP8A2Q9NTI2 1148 aa17.8■□□□□ 0.44
COL9A1-204ENST00000370496 HERC5Q9UII4 1024 aaKnown RBP17.8■□□□□ 0.44
COL9A1-204ENST00000370496 GNAT2P19087 354 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 NOGQ13253 232 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.79■□□□□ 0.44
COL9A1-204ENST00000370496 TTC6Q86TZ1 520 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 SKAP1Q86WV1 359 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 SLC10A4Q96EP9 437 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 A0A0D9SFI3 127 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 HIP1O00291 1037 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 AOC2O75106 756 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 SDSP20132 328 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 INPP5BP32019 993 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 MKRN3Q13064 507 aaKnown RBP17.79■□□□□ 0.44
COL9A1-204ENST00000370496 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
COL9A1-204ENST00000370496 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
COL9A1-204ENST00000370496 FAM227BQ96M60 508 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
COL9A1-204ENST00000370496 FAM155AB1AL88 458 aaPredicted RBP17.78■□□□□ 0.44
COL9A1-204ENST00000370496 TBC1D12O60347 775 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 APPP05067 770 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 TDO2P48775 406 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 CCDC129Q6ZRS4 1044 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 WNK4Q96J92 1243 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 EHD4Q9H223 541 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
COL9A1-204ENST00000370496 SERPINB13Q9UIV8 391 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 SNCAIPQ9Y6H5 919 aa17.78■□□□□ 0.44
COL9A1-204ENST00000370496 MCMDC2Q4G0Z9 681 aa17.77■□□□□ 0.43
COL9A1-204ENST00000370496 OPTNQ96CV9 577 aa17.77■□□□□ 0.43
COL9A1-204ENST00000370496 OTUD5Q96G74 571 aa17.77■□□□□ 0.43
COL9A1-204ENST00000370496 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.43
COL9A1-204ENST00000370496 PICK1Q9NRD5 415 aa17.77■□□□□ 0.43
COL9A1-204ENST00000370496 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.43
COL9A1-204ENST00000370496 ZBTB48P10074 688 aaPredicted RBP17.76■□□□□ 0.43
COL9A1-204ENST00000370496 CYP2D6P10635 497 aa17.76■□□□□ 0.43
COL9A1-204ENST00000370496 MAP3K10Q02779 954 aa17.76■□□□□ 0.43
COL9A1-204ENST00000370496 NOL9Q5SY16 702 aaKnown RBP17.76■□□□□ 0.43
COL9A1-204ENST00000370496 CWC27Q6UX04 472 aaKnown RBP17.76■□□□□ 0.43
COL9A1-204ENST00000370496 FOXP4Q8IVH2 680 aaPredicted RBP17.76■□□□□ 0.43
COL9A1-204ENST00000370496 SCYL3Q8IZE3 742 aa17.76■□□□□ 0.43
COL9A1-204ENST00000370496 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
COL9A1-204ENST00000370496 CCDC171Q6TFL3 1326 aa17.76■□□□□ 0.43
COL9A1-204ENST00000370496 SPDYE5A6NIY4 337 aa17.75■□□□□ 0.43
COL9A1-204ENST00000370496 GSG1L2A8MUP6 293 aa17.75■□□□□ 0.43
COL9A1-204ENST00000370496 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
COL9A1-204ENST00000370496 MAP2K2P36507 400 aa17.75■□□□□ 0.43
COL9A1-204ENST00000370496 PLCD1P51178 756 aa17.75■□□□□ 0.43
COL9A1-204ENST00000370496 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
COL9A1-204ENST00000370496 SPRYD7Q5W111 196 aa17.75■□□□□ 0.43
COL9A1-204ENST00000370496 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
COL9A1-204ENST00000370496 EPB41L4AQ9HCS5 686 aaPredicted RBP17.75■□□□□ 0.43
COL9A1-204ENST00000370496 USP17L12C9JPN9 530 aa17.74■□□□□ 0.43
COL9A1-204ENST00000370496 USP17L21D6R901 530 aa17.74■□□□□ 0.43
COL9A1-204ENST00000370496 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
COL9A1-204ENST00000370496 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
COL9A1-204ENST00000370496 ERO1BQ86YB8 467 aa17.74■□□□□ 0.43
COL9A1-204ENST00000370496 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
COL9A1-204ENST00000370496 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
COL9A1-204ENST00000370496 NAPBQ9H115 298 aa17.74■□□□□ 0.43
COL9A1-204ENST00000370496 LAMA4Q16363 1823 aa17.73■□□□□ 0.43
COL9A1-204ENST00000370496 PHIPQ8WWQ0 1821 aa17.73■□□□□ 0.43
COL9A1-204ENST00000370496 CYP2D7A0A087X1C5 515 aa17.73■□□□□ 0.43
COL9A1-204ENST00000370496 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-204ENST00000370496 EVX2Q03828 476 aa17.73■□□□□ 0.43
COL9A1-204ENST00000370496 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
COL9A1-204ENST00000370496 ZNF589Q86UQ0 364 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-204ENST00000370496 ROBO3Q96MS0 1386 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 RAD50Q92878 1312 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 PATL2C9JE40 543 aaKnown RBP17.72■□□□□ 0.43
COL9A1-204ENST00000370496 GDF11O95390 407 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 GJA5P36382 358 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 CAP2P40123 477 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 MAP2K1Q02750 393 aaPredicted RBP17.72■□□□□ 0.43
COL9A1-204ENST00000370496 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 PPIL2Q13356 520 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 BMP2KLQ5H9B9 411 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 C12orf60Q5U649 245 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 IFNL3Q8IZI9 196 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 ZIC5Q96T25 663 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 SWAP70Q9UH65 585 aa17.72■□□□□ 0.43
COL9A1-204ENST00000370496 PCNTO95613 3336 aa17.71■□□□□ 0.43
COL9A1-204ENST00000370496 MANSC4A6NHS7 340 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-204ENST00000370496 PPATQ06203 517 aa17.71■□□□□ 0.43
COL9A1-204ENST00000370496 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
COL9A1-204ENST00000370496 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
COL9A1-204ENST00000370496 DYNLL2Q96FJ2 89 aa17.71■□□□□ 0.43
COL9A1-204ENST00000370496 BEGAINQ9BUH8 593 aa17.71■□□□□ 0.43
COL9A1-204ENST00000370496 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-204ENST00000370496 PTPRFP10586 1907 aa17.71■□□□□ 0.43
COL9A1-204ENST00000370496 ASNSP08243 561 aa17.7■□□□□ 0.42
COL9A1-204ENST00000370496 PTPRAP18433 802 aa17.7■□□□□ 0.42
COL9A1-204ENST00000370496 SHMT1P34896 483 aa17.7■□□□□ 0.42
COL9A1-204ENST00000370496 GABPAQ06546 454 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms