RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 KRT28Q7Z3Y7 464 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 N4BP2L2Q92802 583 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 PPP1R37O75864 691 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 BBOX1O75936 387 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 MSL3P1P0C860 447 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 ENPP1P22413 925 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 HOXD10P28358 340 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 EIF4A1P60842 406 aaKnown RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 SFSWAPQ12872 951 aaKnown RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 BIRC3Q13489 604 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 RABEP1Q15276 862 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 EAPPQ56P03 285 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 MTERF4Q7Z6M4 381 aaKnown RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 PGBD3Q8N328 593 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 TDRD7Q8NHU6 1098 aaKnown RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 GABPB2Q8TAK5 448 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 RNF34Q969K3 372 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 ORAI2Q96SN7 254 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 TEX13AQ9BXU3 409 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-202ENST00000368905 LRRCC1Q9C099 1032 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
SCNM1-202ENST00000368905 KDM3BQ7LBC6 1761 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 C1orf167Q5SNV9 1468 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 BTBD11A6QL63 1104 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 LZTS3O60299 673 aaPredicted RBP11.47□□□□□ -0.57
SCNM1-202ENST00000368905 BAIAP3O94812 1187 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 KIF5BP33176 963 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
SCNM1-202ENST00000368905 LRCH2Q5VUJ6 765 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 KIAA1614Q5VZ46 1190 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 ANKRD24Q8TF21 1146 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 SELENOOQ9BVL4 669 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 C12orf49Q9H741 205 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 NGRNQ9NPE2 291 aaKnown RBP11.47□□□□□ -0.57
SCNM1-202ENST00000368905 PGAP2Q9UHJ9 254 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 GTF2A1LQ9UNN4 478 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
SCNM1-202ENST00000368905 PLEKHG2Q9H7P9 1386 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 SMTNL1A8MU46 457 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 FAM25EA8MYX2 175 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 H0Y3Z8 333 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 NCAM1P13591 858 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 WDR45BQ5MNZ6 344 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 NEK9Q8TD19 979 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 DDX41Q9UJV9 622 aaKnown RBP11.47□□□□□ -0.57
SCNM1-202ENST00000368905 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
SCNM1-202ENST00000368905 MAFBQ9Y5Q3 323 aaPredicted RBP11.47□□□□□ -0.57
SCNM1-202ENST00000368905 TOM1O60784 492 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 NR1I2O75469 434 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 PODNQ7Z5L7 613 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 C14orf80Q86SX3 495 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 RASSF3Q86WH2 238 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 CENPOQ9BU64 300 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 TMX1Q9H3N1 280 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 SLAIN2Q9P270 581 aa11.46□□□□□ -0.57
SCNM1-202ENST00000368905 RRP15Q9Y3B9 282 aaKnown RBP11.46□□□□□ -0.57
SCNM1-202ENST00000368905 AOX1Q06278 1338 aa11.46□□□□□ -0.58
SCNM1-202ENST00000368905 CAMTA1Q9Y6Y1 1673 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 GNPATO15228 680 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 RNMTO43148 476 aaKnown RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 IDEP14735 1019 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 SDSP20132 328 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 ADD2P35612 726 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 PDE1AP54750 535 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 EIF2B5Q13144 721 aaKnown RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 PTPN14Q15678 1187 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 BRDTQ58F21 947 aaPredicted RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 MCF2L2Q86YR7 1114 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 C16orf71Q8IYS4 520 aaPredicted RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 NELL2Q99435 816 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 MED4Q9NPJ6 270 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 DIAPH3Q9NSV4 1193 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 DDX49Q9Y6V7 483 aaKnown RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 IBTKQ9P2D0 1353 aaPredicted RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 ERC2O15083 957 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 EIF2S2P20042 333 aaKnown RBP11.45□□□□□ -0.58
SCNM1-202ENST00000368905 MAPK1P28482 360 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 CFAP161Q6P656 301 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 SH3KBP1Q96B97 665 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 ASB16Q96NS5 453 aa11.45□□□□□ -0.58
SCNM1-202ENST00000368905 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 UBAP1LF5GYI3 381 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 GYS1P13807 737 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 PPM1FP49593 454 aaPredicted RBP11.44□□□□□ -0.58
SCNM1-202ENST00000368905 FAM83BQ5T0W9 1011 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 ZNF713Q8N859 430 aaPredicted RBP11.44□□□□□ -0.58
SCNM1-202ENST00000368905 SH3TC2Q8TF17 1288 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 LRRC59Q96AG4 307 aaKnown RBP11.44□□□□□ -0.58
SCNM1-202ENST00000368905 FAM167BQ9BTA0 163 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 USP26Q9BXU7 913 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 RPAP3Q9H6T3 665 aaPredicted RBP11.44□□□□□ -0.58
SCNM1-202ENST00000368905 TMOD4Q9NZQ9 345 aa11.44□□□□□ -0.58
SCNM1-202ENST00000368905 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.44□□□□□ -0.58
SCNM1-202ENST00000368905 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms