RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 DCP1AQ9NPI6 582 aaPredicted RBP18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
SMPDL3A-201ENST00000368440 NOGQ13253 232 aa18.15■□□□□ 0.5
SMPDL3A-201ENST00000368440 ZMYM1Q5SVZ6 1142 aa18.15■□□□□ 0.5
SMPDL3A-201ENST00000368440 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
SMPDL3A-201ENST00000368440 DNAJC18Q9H819 358 aa18.15■□□□□ 0.5
SMPDL3A-201ENST00000368440 UNCXA6NJT0 531 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 GPAA1O43292 621 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 LRRFIP1Q32MZ4 808 aaKnown RBP18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 WNK4Q96J92 1243 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 CSADQ9Y600 493 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 TBC1D12O60347 775 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 SPRYD7Q5W111 196 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 PI4KBQ9UBF8 816 aa18.14■□□□□ 0.49
SMPDL3A-201ENST00000368440 PHIPQ8WWQ0 1821 aa18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 CYP2D6P10635 497 aa18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 MAP2K2P36507 400 aa18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 PLCD1P51178 756 aa18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 RRP1BQ14684 758 aaKnown RBP18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 OPTNQ96CV9 577 aa18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
SMPDL3A-201ENST00000368440 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 SMIM22K7EJ46 135 aa18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 ATP8A2Q9NTI2 1148 aa18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 HLA-DOAP06340 250 aa18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 METTL16Q86W50 562 aaKnown RBP18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 HERC5Q9UII4 1024 aaKnown RBP18.12■□□□□ 0.49
SMPDL3A-201ENST00000368440 CYP2D7A0A087X1C5 515 aa18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 GSG1L2A8MUP6 293 aa18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 NMIQ13287 307 aaPredicted RBP18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 NOL9Q5SY16 702 aaKnown RBP18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 CRACR2BQ8N4Y2 399 aaPredicted RBP18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 MYH8P13535 1937 aa18.11■□□□□ 0.49
SMPDL3A-201ENST00000368440 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
SMPDL3A-201ENST00000368440 SDSP20132 328 aa18.1■□□□□ 0.49
SMPDL3A-201ENST00000368440 SHROOM1Q2M3G4 852 aaPredicted RBP18.1■□□□□ 0.49
SMPDL3A-201ENST00000368440 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 TTC6Q86TZ1 520 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 FOXP4Q8IVH2 680 aaPredicted RBP18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 SCYL3Q8IZE3 742 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 EHD4Q9H223 541 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 FOXP2O15409 715 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 CTNND1O60716 968 aaKnown RBP18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 JAG1P78504 1218 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 CCDC84Q86UT8 332 aaPredicted RBP18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 ERO1BQ86YB8 467 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 SERPINB13Q9UIV8 391 aa18.09■□□□□ 0.49
SMPDL3A-201ENST00000368440 USP17L12C9JPN9 530 aa18.08■□□□□ 0.49
SMPDL3A-201ENST00000368440 USP17L21D6R901 530 aa18.08■□□□□ 0.49
SMPDL3A-201ENST00000368440 CTR9Q6PD62 1173 aa18.08■□□□□ 0.49
SMPDL3A-201ENST00000368440 ZNF589Q86UQ0 364 aaPredicted RBP18.08■□□□□ 0.49
SMPDL3A-201ENST00000368440 DYNLL2Q96FJ2 89 aa18.08■□□□□ 0.49
SMPDL3A-201ENST00000368440 TRIM34Q9BYJ4 488 aa18.08■□□□□ 0.49
SMPDL3A-201ENST00000368440 HELLSQ9NRZ9 838 aa18.08■□□□□ 0.49
SMPDL3A-201ENST00000368440 PTPRFP10586 1907 aa18.08■□□□□ 0.48
SMPDL3A-201ENST00000368440 GDF11O95390 407 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 CAP2P40123 477 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 GABPAQ06546 454 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 C12orf60Q5U649 245 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 IRF6O14896 467 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 PTPRAP18433 802 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 GNAT2P19087 354 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 SHMT1P34896 483 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 TICAM2Q86XR7 235 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 SLC44A5Q8NCS7 719 aa18.07■□□□□ 0.48
SMPDL3A-201ENST00000368440 PATL2C9JE40 543 aaKnown RBP18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 APPP05067 770 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 PPATQ06203 517 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 PPIL2Q13356 520 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 MCMDC2Q4G0Z9 681 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 TATDN1Q6P1N9 297 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 IFNL3Q8IZI9 196 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 DDRGK1Q96HY6 314 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 MS4A4AQ96JQ5 239 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 PICK1Q9NRD5 415 aa18.06■□□□□ 0.48
SMPDL3A-201ENST00000368440 FOXN1O15353 648 aa18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 GIMAP6Q6P9H5 292 aa18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 CWC27Q6UX04 472 aaKnown RBP18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 DIAPH3Q9NSV4 1193 aa18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 MANSC4A6NHS7 340 aaPredicted RBP18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 TM4SF4P48230 202 aa18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 TDO2P48775 406 aa18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 IL25Q9H293 177 aa18.05■□□□□ 0.48
SMPDL3A-201ENST00000368440 TSKSQ9UJT2 592 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms