RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 WDR33Q9C0J8 1336 aaKnown RBP22.4■■□□□ 1.18
LMNA-204ENST00000368298 A0A0D9SFI3 127 aa22.4■■□□□ 1.18
LMNA-204ENST00000368298 PATL2C9JE40 543 aaKnown RBP22.4■■□□□ 1.18
LMNA-204ENST00000368298 SLC10A3P09131 477 aa22.4■■□□□ 1.18
LMNA-204ENST00000368298 NMIQ13287 307 aaPredicted RBP22.4■■□□□ 1.18
LMNA-204ENST00000368298 SKAP1Q86WV1 359 aa22.4■■□□□ 1.18
LMNA-204ENST00000368298 SLC10A4Q96EP9 437 aa22.4■■□□□ 1.18
LMNA-204ENST00000368298 DDRGK1Q96HY6 314 aa22.4■■□□□ 1.18
LMNA-204ENST00000368298 CLMNQ96JQ2 1002 aa22.4■■□□□ 1.18
LMNA-204ENST00000368298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.4■■□□□ 1.18
LMNA-204ENST00000368298 MCM9Q9NXL9 1143 aa22.4■■□□□ 1.18
LMNA-204ENST00000368298 THSD7BQ9C0I4 1608 aa22.39■■□□□ 1.17
LMNA-204ENST00000368298 VGLL4Q14135 290 aa22.39■■□□□ 1.17
LMNA-204ENST00000368298 BMP2KLQ5H9B9 411 aa22.39■■□□□ 1.17
LMNA-204ENST00000368298 NOL9Q5SY16 702 aaKnown RBP22.39■■□□□ 1.17
LMNA-204ENST00000368298 RASAL3Q86YV0 1011 aa22.39■■□□□ 1.17
LMNA-204ENST00000368298 BAZ2AQ9UIF9 1905 aaKnown RBP22.39■■□□□ 1.17
LMNA-204ENST00000368298 CTNND1O60716 968 aaKnown RBP22.38■■□□□ 1.17
LMNA-204ENST00000368298 SLURP2P0DP57 97 aa22.38■■□□□ 1.17
LMNA-204ENST00000368298 INPP5BP32019 993 aa22.38■■□□□ 1.17
LMNA-204ENST00000368298 PLCD1P51178 756 aa22.38■■□□□ 1.17
LMNA-204ENST00000368298 SBK1Q52WX2 424 aa22.38■■□□□ 1.17
LMNA-204ENST00000368298 DNAJC18Q9H819 358 aa22.38■■□□□ 1.17
LMNA-204ENST00000368298 SERPINB13Q9UIV8 391 aa22.38■■□□□ 1.17
LMNA-204ENST00000368298 CSADQ9Y600 493 aa22.38■■□□□ 1.17
LMNA-204ENST00000368298 POLR3DP05423 398 aaPredicted RBP22.37■■□□□ 1.17
LMNA-204ENST00000368298 MAP2K2P36507 400 aa22.37■■□□□ 1.17
LMNA-204ENST00000368298 GABPAQ06546 454 aa22.37■■□□□ 1.17
LMNA-204ENST00000368298 NOGQ13253 232 aa22.37■■□□□ 1.17
LMNA-204ENST00000368298 C12orf60Q5U649 245 aa22.37■■□□□ 1.17
LMNA-204ENST00000368298 CTR9Q6PD62 1173 aa22.37■■□□□ 1.17
LMNA-204ENST00000368298 ZKSCAN4Q969J2 545 aaPredicted RBP22.37■■□□□ 1.17
LMNA-204ENST00000368298 DIAPH3Q9NSV4 1193 aa22.37■■□□□ 1.17
LMNA-204ENST00000368298 SNCAIPQ9Y6H5 919 aa22.37■■□□□ 1.17
LMNA-204ENST00000368298 USP17L12C9JPN9 530 aa22.36■■□□□ 1.17
LMNA-204ENST00000368298 USP17L21D6R901 530 aa22.36■■□□□ 1.17
LMNA-204ENST00000368298 FOXP2O15409 715 aa22.36■■□□□ 1.17
LMNA-204ENST00000368298 CCDC129Q6ZRS4 1044 aa22.36■■□□□ 1.17
LMNA-204ENST00000368298 PAXIP1Q6ZW49 1069 aaPredicted RBP22.36■■□□□ 1.17
LMNA-204ENST00000368298 EPB41L4AQ9HCS5 686 aaPredicted RBP22.36■■□□□ 1.17
LMNA-204ENST00000368298 ARPP21Q9UBL0 812 aaPredicted RBP22.36■■□□□ 1.17
LMNA-204ENST00000368298 PCNTO95613 3336 aa22.36■■□□□ 1.17
LMNA-204ENST00000368298 LAMB1P07942 1786 aa22.36■■□□□ 1.17
LMNA-204ENST00000368298 ZBTB48P10074 688 aaPredicted RBP22.35■■□□□ 1.17
LMNA-204ENST00000368298 MFAP1P55081 439 aaKnown RBP22.35■■□□□ 1.17
LMNA-204ENST00000368298 SPRYD7Q5W111 196 aa22.35■■□□□ 1.17
LMNA-204ENST00000368298 TATDN1Q6P1N9 297 aa22.35■■□□□ 1.17
LMNA-204ENST00000368298 CWC27Q6UX04 472 aaKnown RBP22.35■■□□□ 1.17
LMNA-204ENST00000368298 IFNL3Q8IZI9 196 aa22.35■■□□□ 1.17
LMNA-204ENST00000368298 CRACR2BQ8N4Y2 399 aaPredicted RBP22.35■■□□□ 1.17
LMNA-204ENST00000368298 FAM196BA6NMK8 535 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 CHMLP26374 656 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 ZNF589Q86UQ0 364 aaPredicted RBP22.34■■□□□ 1.17
LMNA-204ENST00000368298 ERO1BQ86YB8 467 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 AMOTL1Q8IY63 956 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 SCYL3Q8IZE3 742 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 NACAP1Q9BZK3 213 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 RBM19Q9Y4C8 960 aaKnown RBP22.34■■□□□ 1.17
LMNA-204ENST00000368298 CCDC171Q6TFL3 1326 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 SPDYE5A6NIY4 337 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 CAP2P40123 477 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 ALX1Q15699 326 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 WNK4Q96J92 1243 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 ELP3Q9H9T3 547 aa22.34■■□□□ 1.17
LMNA-204ENST00000368298 DOCK1Q14185 1865 aa22.33■■□□□ 1.17
LMNA-204ENST00000368298 APPP05067 770 aa22.33■■□□□ 1.16
LMNA-204ENST00000368298 CYP2D6P10635 497 aa22.33■■□□□ 1.16
LMNA-204ENST00000368298 RRP1BQ14684 758 aaKnown RBP22.33■■□□□ 1.16
LMNA-204ENST00000368298 SLC4A8Q2Y0W8 1093 aa22.33■■□□□ 1.16
LMNA-204ENST00000368298 TRIM34Q9BYJ4 488 aa22.33■■□□□ 1.16
LMNA-204ENST00000368298 GINM1Q9NU53 330 aa22.33■■□□□ 1.16
LMNA-204ENST00000368298 AOC2O75106 756 aa22.32■■□□□ 1.16
LMNA-204ENST00000368298 HSPD1P10809 573 aaKnown RBP22.32■■□□□ 1.16
LMNA-204ENST00000368298 EVX2Q03828 476 aa22.32■■□□□ 1.16
LMNA-204ENST00000368298 PPATQ06203 517 aa22.32■■□□□ 1.16
LMNA-204ENST00000368298 VPS53Q5VIR6 699 aa22.32■■□□□ 1.16
LMNA-204ENST00000368298 REM2Q8IYK8 340 aaPredicted RBP22.32■■□□□ 1.16
LMNA-204ENST00000368298 OPTNQ96CV9 577 aa22.32■■□□□ 1.16
LMNA-204ENST00000368298 SWAP70Q9UH65 585 aa22.32■■□□□ 1.16
LMNA-204ENST00000368298 RAD50Q92878 1312 aa22.32■■□□□ 1.16
LMNA-204ENST00000368298 SHMT1P34896 483 aa22.31■■□□□ 1.16
LMNA-204ENST00000368298 GJA5P36382 358 aa22.31■■□□□ 1.16
LMNA-204ENST00000368298 TDO2P48775 406 aa22.31■■□□□ 1.16
LMNA-204ENST00000368298 GRM1Q13255 1194 aa22.31■■□□□ 1.16
LMNA-204ENST00000368298 RUFY2Q8WXA3 655 aa22.31■■□□□ 1.16
LMNA-204ENST00000368298 ZMYM6O95789 1325 aa22.31■■□□□ 1.16
LMNA-204ENST00000368298 ROBO3Q96MS0 1386 aa22.31■■□□□ 1.16
LMNA-204ENST00000368298 CYP2D7A0A087X1C5 515 aa22.3■■□□□ 1.16
LMNA-204ENST00000368298 PTPRAP18433 802 aa22.3■■□□□ 1.16
LMNA-204ENST00000368298 KIF23Q02241 960 aaPredicted RBP22.3■■□□□ 1.16
LMNA-204ENST00000368298 C16orf86Q6ZW13 317 aa22.3■■□□□ 1.16
LMNA-204ENST00000368298 ZIC5Q96T25 663 aa22.3■■□□□ 1.16
LMNA-204ENST00000368298 NAPBQ9H115 298 aa22.3■■□□□ 1.16
LMNA-204ENST00000368298 ATAD5Q96QE3 1844 aa22.3■■□□□ 1.16
LMNA-204ENST00000368298 PPIL2Q13356 520 aa22.29■■□□□ 1.16
LMNA-204ENST00000368298 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
LMNA-204ENST00000368298 IL25Q9H293 177 aa22.29■■□□□ 1.16
LMNA-204ENST00000368298 PICK1Q9NRD5 415 aa22.29■■□□□ 1.16
LMNA-204ENST00000368298 SMIM22K7EJ46 135 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 FGAP02671 866 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms