RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SDR42E1Q8WUS8 393 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 OTUD5Q96G74 571 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 MS4A4AQ96JQ5 239 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 CRNKL1Q9BZJ0 848 aaKnown RBP27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 DNAJC18Q9H819 358 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 RNF186Q9NXI6 227 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 TSKSQ9UJT2 592 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 PTPRFP10586 1907 aa27.08■■□□□ 1.93
ECHDC1-203ENST00000368291 MANSC4A6NHS7 340 aaPredicted RBP27.08■■□□□ 1.93
ECHDC1-203ENST00000368291 CTCFP49711 727 aaPredicted RBP27.08■■□□□ 1.93
ECHDC1-203ENST00000368291 RRP1BQ14684 758 aaKnown RBP27.08■■□□□ 1.93
ECHDC1-203ENST00000368291 HERC5Q9UII4 1024 aaKnown RBP27.08■■□□□ 1.93
ECHDC1-203ENST00000368291 RNF113AO15541 343 aaKnown RBP27.07■■□□□ 1.92
ECHDC1-203ENST00000368291 CA12O43570 354 aa27.07■■□□□ 1.92
ECHDC1-203ENST00000368291 PRKAB2O43741 272 aa27.07■■□□□ 1.92
ECHDC1-203ENST00000368291 SREBF2Q12772 1141 aa27.07■■□□□ 1.92
ECHDC1-203ENST00000368291 SLC4A8Q2Y0W8 1093 aa27.07■■□□□ 1.92
ECHDC1-203ENST00000368291 OSBP2Q969R2 916 aa27.07■■□□□ 1.92
ECHDC1-203ENST00000368291 CASP8AP2Q9UKL3 1982 aa27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 TESPA1A2RU30 521 aaPredicted RBP27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 LBX1P52954 281 aa27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 FOXP4Q8IVH2 680 aaPredicted RBP27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 SCYL3Q8IZE3 742 aa27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 APPBP2Q92624 585 aa27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 OSBPL3Q9H4L5 887 aa27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 DCP1AQ9NPI6 582 aaPredicted RBP27.06■■□□□ 1.92
ECHDC1-203ENST00000368291 IRF6O14896 467 aa27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 CTNND1O60716 968 aaKnown RBP27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 TRPA1O75762 1119 aa27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 ZFYP08048 801 aaPredicted RBP27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 INHBEP58166 350 aa27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 PPATQ06203 517 aa27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 PPIL2Q13356 520 aa27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 SAGE1Q9NXZ1 904 aa27.05■■□□□ 1.92
ECHDC1-203ENST00000368291 PTPN18Q99952 460 aa27.04■■□□□ 1.92
ECHDC1-203ENST00000368291 IGF2BP3O00425 579 aaKnown RBP eCLIP27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 HLA-DOAP06340 250 aa27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 PDE4AP27815 886 aa27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 PLCD1P51178 756 aa27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 EVX2Q03828 476 aa27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 IFNL1Q8IU54 200 aa27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 EVI5LQ96CN4 794 aa27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 FSD1Q9BTV5 496 aa27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.03■■□□□ 1.92
ECHDC1-203ENST00000368291 BRI3BPQ8WY22 251 aa27.02■■□□□ 1.92
ECHDC1-203ENST00000368291 STRBPQ96SI9 672 aaKnown RBP27.02■■□□□ 1.92
ECHDC1-203ENST00000368291 MYH8P13535 1937 aa27.02■■□□□ 1.92
ECHDC1-203ENST00000368291 M0R2C6 588 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 PTPRAP18433 802 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 CAP2P40123 477 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 GTF2A2P52657 109 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 SEC62Q99442 399 aaKnown RBP27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 EHD4Q9H223 541 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 PRDM10Q9NQV6 1147 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 MCM9Q9NXL9 1143 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 KCNH4Q9UQ05 1017 aa27.01■■□□□ 1.91
ECHDC1-203ENST00000368291 JAG1P78504 1218 aa27■■□□□ 1.91
ECHDC1-203ENST00000368291 LRRFIP1Q32MZ4 808 aaKnown RBP27■■□□□ 1.91
ECHDC1-203ENST00000368291 ZMYM1Q5SVZ6 1142 aa27■■□□□ 1.91
ECHDC1-203ENST00000368291 TTC6Q86TZ1 520 aa27■■□□□ 1.91
ECHDC1-203ENST00000368291 CRACR2BQ8N4Y2 399 aaPredicted RBP27■■□□□ 1.91
ECHDC1-203ENST00000368291 ATP8A2Q9NTI2 1148 aa27■■□□□ 1.91
ECHDC1-203ENST00000368291 COL13A1Q5TAT6 717 aaPredicted RBP26.99■■□□□ 1.91
ECHDC1-203ENST00000368291 CCDC84Q86UT8 332 aaPredicted RBP26.99■■□□□ 1.91
ECHDC1-203ENST00000368291 PICK1Q9NRD5 415 aa26.99■■□□□ 1.91
ECHDC1-203ENST00000368291 SERPINB13Q9UIV8 391 aa26.99■■□□□ 1.91
ECHDC1-203ENST00000368291 SLC4A4Q9Y6R1 1079 aa26.99■■□□□ 1.91
ECHDC1-203ENST00000368291 ZHX2Q9Y6X8 837 aa26.99■■□□□ 1.91
ECHDC1-203ENST00000368291 CCL15-CCL14A0A0B4J2E2 113 aa26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 GPAA1O43292 621 aa26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 POLR3DP05423 398 aaPredicted RBP26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 CYP2D6P10635 497 aa26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 GABPAQ06546 454 aa26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 CCL15Q16663 113 aa26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 SHROOM1Q2M3G4 852 aaPredicted RBP26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 AFG3L2Q9Y4W6 797 aa26.98■■□□□ 1.91
ECHDC1-203ENST00000368291 TBC1D8O95759 1140 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 SNAPC2Q13487 334 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 TATDN1Q6P1N9 297 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 CFHR5Q9BXR6 569 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 R3HDMLQ9H3Y0 253 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 GSG1L2A8MUP6 293 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 SMIM22K7EJ46 135 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 MOGSQ13724 837 aa26.97■■□□□ 1.91
ECHDC1-203ENST00000368291 CXCL11O14625 94 aa26.96■■□□□ 1.91
ECHDC1-203ENST00000368291 CETPP11597 493 aa26.96■■□□□ 1.91
ECHDC1-203ENST00000368291 TRIM34Q9BYJ4 488 aa26.96■■□□□ 1.91
ECHDC1-203ENST00000368291 CYP2D7A0A087X1C5 515 aa26.95■■□□□ 1.9
ECHDC1-203ENST00000368291 TRIM6-TRIM34B2RNG4 842 aa26.95■■□□□ 1.9
ECHDC1-203ENST00000368291 USP17L12C9JPN9 530 aa26.95■■□□□ 1.9
ECHDC1-203ENST00000368291 USP17L21D6R901 530 aa26.95■■□□□ 1.9
ECHDC1-203ENST00000368291 ALDH1A1P00352 501 aa26.95■■□□□ 1.9
ECHDC1-203ENST00000368291 SHMT1P34896 483 aa26.95■■□□□ 1.9
ECHDC1-203ENST00000368291 FAM43AQ8N2R8 423 aa26.95■■□□□ 1.9
ECHDC1-203ENST00000368291 BTBD19C9JJ37 291 aa26.94■■□□□ 1.9
ECHDC1-203ENST00000368291 GDF11O95390 407 aa26.94■■□□□ 1.9
ECHDC1-203ENST00000368291 C12orf60Q5U649 245 aa26.94■■□□□ 1.9
ECHDC1-203ENST00000368291 CTR9Q6PD62 1173 aa26.94■■□□□ 1.9
ECHDC1-203ENST00000368291 RILPL2Q969X0 211 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms