RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 SLURP2P0DP57 97 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 CTGFP29279 349 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 PSMC4P43686 418 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
PARP1-201ENST00000366790 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 EAF2Q96CJ1 260 aaPredicted RBP12.74□□□□□ -0.37
PARP1-201ENST00000366790 TRIM47Q96LD4 638 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 SRRDQ9UH36 339 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 CEP290O15078 2479 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 DOCK3Q8IZD9 2030 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
PARP1-201ENST00000366790 CYP2C8P10632 490 aa12.73□□□□□ -0.37
PARP1-201ENST00000366790 CAP2P40123 477 aa12.73□□□□□ -0.37
PARP1-201ENST00000366790 ZAP70P43403 619 aa12.73□□□□□ -0.37
PARP1-201ENST00000366790 HSP90AB4PQ58FF6 505 aa12.73□□□□□ -0.37
PARP1-201ENST00000366790 CERS3Q8IU89 383 aa12.73□□□□□ -0.37
PARP1-201ENST00000366790 PROCA1Q8NCQ7 364 aaPredicted RBP12.73□□□□□ -0.37
PARP1-201ENST00000366790 SH3RF3Q8TEJ3 882 aaPredicted RBP12.73□□□□□ -0.37
PARP1-201ENST00000366790 AATFQ9NY61 560 aaKnown RBP eCLIP12.73□□□□□ -0.37
PARP1-201ENST00000366790 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
PARP1-201ENST00000366790 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
PARP1-201ENST00000366790 OSBPP22059 807 aa12.72□□□□□ -0.37
PARP1-201ENST00000366790 GADL1Q6ZQY3 521 aa12.72□□□□□ -0.37
PARP1-201ENST00000366790 ADGRA1Q86SQ6 560 aa12.72□□□□□ -0.37
PARP1-201ENST00000366790 FOXP4Q8IVH2 680 aaPredicted RBP12.72□□□□□ -0.37
PARP1-201ENST00000366790 ZNF280CQ8ND82 737 aa12.72□□□□□ -0.37
PARP1-201ENST00000366790 PANK1Q8TE04 598 aa12.72□□□□□ -0.37
PARP1-201ENST00000366790 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
PARP1-201ENST00000366790 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
PARP1-201ENST00000366790 TLR7Q9NYK1 1049 aaKnown RBP12.72□□□□□ -0.37
PARP1-201ENST00000366790 FLT1P17948 1338 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 MYPNQ86TC9 1320 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 MYH1P12882 1939 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 FAM196BA6NMK8 535 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 FMNL1O95466 1100 aaPredicted RBP12.71□□□□□ -0.37
PARP1-201ENST00000366790 FCGRTP55899 365 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 RRP1BQ14684 758 aaKnown RBP12.71□□□□□ -0.37
PARP1-201ENST00000366790 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 TGFBRAP1Q8WUH2 860 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.37
PARP1-201ENST00000366790 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
PARP1-201ENST00000366790 USP17L5A8MUK1 530 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 ASNSP08243 561 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 GRK4P32298 578 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 SPP2Q13103 211 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 SLC4A8Q2Y0W8 1093 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
PARP1-201ENST00000366790 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
PARP1-201ENST00000366790 WDR18Q9BV38 432 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.7□□□□□ -0.38
PARP1-201ENST00000366790 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
PARP1-201ENST00000366790 CYP7A1P22680 504 aa12.69□□□□□ -0.38
PARP1-201ENST00000366790 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.38
PARP1-201ENST00000366790 IRF5Q13568 498 aa12.69□□□□□ -0.38
PARP1-201ENST00000366790 FAM110CQ1W6H9 321 aa12.69□□□□□ -0.38
PARP1-201ENST00000366790 MAPKAPK5Q8IW41 473 aa12.69□□□□□ -0.38
PARP1-201ENST00000366790 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
PARP1-201ENST00000366790 SMCR8Q8TEV9 937 aaPredicted RBP12.69□□□□□ -0.38
PARP1-201ENST00000366790 CHMP4BQ9H444 224 aaKnown RBP12.69□□□□□ -0.38
PARP1-201ENST00000366790 DNAJC18Q9H819 358 aa12.69□□□□□ -0.38
PARP1-201ENST00000366790 ZBTB40Q9NUA8 1239 aa12.69□□□□□ -0.38
PARP1-201ENST00000366790 HMMRO75330 724 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 IDH1O75874 414 aaKnown RBP12.68□□□□□ -0.38
PARP1-201ENST00000366790 HLA-DOAP06340 250 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 GCLCP48506 637 aaPredicted RBP12.68□□□□□ -0.38
PARP1-201ENST00000366790 PRKCZQ05513 592 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 AACSQ86V21 672 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 SLAIN1Q8ND83 568 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.68□□□□□ -0.38
PARP1-201ENST00000366790 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
PARP1-201ENST00000366790 C19orf81C9J6K1 198 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 CAPN2P17655 700 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 HMGCS2P54868 508 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 BACE1P56817 501 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 DYNLL1P63167 89 aaKnown RBP12.67□□□□□ -0.38
PARP1-201ENST00000366790 TTF1Q15361 905 aaPredicted RBP12.67□□□□□ -0.38
PARP1-201ENST00000366790 CLASRPQ8N2M8 674 aaKnown RBP12.67□□□□□ -0.38
PARP1-201ENST00000366790 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 EHD4Q9H223 541 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 ANTXR1Q9H6X2 564 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 PALD1Q9ULE6 856 aa12.67□□□□□ -0.38
PARP1-201ENST00000366790 TNPO2O14787 897 aaKnown RBP12.66□□□□□ -0.38
PARP1-201ENST00000366790 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
PARP1-201ENST00000366790 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
PARP1-201ENST00000366790 GJB1P08034 283 aa12.66□□□□□ -0.38
PARP1-201ENST00000366790 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
PARP1-201ENST00000366790 FLT3LGP49771 235 aa12.66□□□□□ -0.38
PARP1-201ENST00000366790 UBXN2AP68543 259 aa12.66□□□□□ -0.38
PARP1-201ENST00000366790 MTFR1Q15390 333 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms