RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 GPR75-ASB3A0A0A6YYF3 556 aa14.18□□□□□ -0.14
MRPL55-212ENST00000366739 HMGCRP04035 888 aa14.18□□□□□ -0.14
MRPL55-212ENST00000366739 HMGCS2P54868 508 aa14.18□□□□□ -0.14
MRPL55-212ENST00000366739 RRP1BQ14684 758 aaKnown RBP14.18□□□□□ -0.14
MRPL55-212ENST00000366739 ZNF280CQ8ND82 737 aa14.18□□□□□ -0.14
MRPL55-212ENST00000366739 GJD2Q9UKL4 321 aa14.18□□□□□ -0.14
MRPL55-212ENST00000366739 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
MRPL55-212ENST00000366739 A0A0C4DFX4 3053 aa14.17□□□□□ -0.14
MRPL55-212ENST00000366739 GCLCP48506 637 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-212ENST00000366739 MNX1P50219 401 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-212ENST00000366739 SLFN5Q08AF3 891 aa14.17□□□□□ -0.14
MRPL55-212ENST00000366739 ERICH6Q7L0X2 663 aa14.17□□□□□ -0.14
MRPL55-212ENST00000366739 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
MRPL55-212ENST00000366739 XAGE2Q96GT9 111 aa14.17□□□□□ -0.14
MRPL55-212ENST00000366739 OSBPL5Q9H0X9 879 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-212ENST00000366739 ASCC2Q9H1I8 757 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-212ENST00000366739 A0A1B0GUL7 405 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
MRPL55-212ENST00000366739 SYN1P17600 705 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 BMP8BP34820 402 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 TFCP2Q12800 502 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 MEIS3Q99687 375 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 NBPF3Q9H094 633 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
MRPL55-212ENST00000366739 NOB1Q9ULX3 412 aaKnown RBP14.16□□□□□ -0.14
MRPL55-212ENST00000366739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
MRPL55-212ENST00000366739 LOC285556D6RIA3 1793 aa14.16□□□□□ -0.14
MRPL55-212ENST00000366739 RPTORQ8N122 1335 aa14.15□□□□□ -0.14
MRPL55-212ENST00000366739 CAP2P40123 477 aa14.15□□□□□ -0.14
MRPL55-212ENST00000366739 PABPC4Q13310 644 aaKnown RBP eCLIP14.15□□□□□ -0.145e-7■■■■■ 27.9
MRPL55-212ENST00000366739 MVPQ14764 893 aaKnown RBP14.15□□□□□ -0.14
MRPL55-212ENST00000366739 TBC1D9Q6ZT07 1266 aa14.15□□□□□ -0.14
MRPL55-212ENST00000366739 TRIB2Q92519 343 aa14.15□□□□□ -0.14
MRPL55-212ENST00000366739 NSUN4Q96CB9 384 aaKnown RBP14.15□□□□□ -0.14
MRPL55-212ENST00000366739 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
MRPL55-212ENST00000366739 HMG20BQ9P0W2 317 aa14.15□□□□□ -0.14
MRPL55-212ENST00000366739 COL2A1P02458 1487 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-212ENST00000366739 USP17L5A8MUK1 530 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 PEX10O60683 326 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 MAGEA10P43363 369 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-212ENST00000366739 SH3D19Q5HYK7 790 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 Q7L0L9 218 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 DEFB123Q8N688 67 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 TBC1D2Q9BYX2 928 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 C11orf49Q9H6J7 331 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 MORF4L1Q9UBU8 362 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
MRPL55-212ENST00000366739 DDX60LQ5H9U9 1706 aaKnown RBP14.13□□□□□ -0.15
MRPL55-212ENST00000366739 MAP4K4O95819 1239 aaPredicted RBP14.13□□□□□ -0.15
MRPL55-212ENST00000366739 LDHCP07864 332 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 CYP2B6P20813 491 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 GSTO1P78417 241 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 MTMR2Q13614 643 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 TEX11Q8IYF3 940 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 SPATA5Q8NB90 893 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 NEUROD6Q96NK8 337 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 API5Q9BZZ5 524 aaKnown RBP14.13□□□□□ -0.15
MRPL55-212ENST00000366739 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 OGDHLQ9ULD0 1010 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
MRPL55-212ENST00000366739 SRGAP3O43295 1099 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 PRKAR2AP13861 404 aaKnown RBP14.12□□□□□ -0.15
MRPL55-212ENST00000366739 IRX3P78415 501 aaPredicted RBP14.12□□□□□ -0.15
MRPL55-212ENST00000366739 JAG1P78504 1218 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 MAP3K21Q5TCX8 1036 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 GPR153Q6NV75 609 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 SH3RF3Q8TEJ3 882 aaPredicted RBP14.12□□□□□ -0.15
MRPL55-212ENST00000366739 P2RX7Q99572 595 aaKnown RBP14.12□□□□□ -0.15
MRPL55-212ENST00000366739 AS3MTQ9HBK9 375 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 TXNRD2Q9NNW7 524 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 HERC5Q9UII4 1024 aaKnown RBP14.12□□□□□ -0.15
MRPL55-212ENST00000366739 PLXNB2O15031 1838 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 PFASO15067 1338 aa14.12□□□□□ -0.15
MRPL55-212ENST00000366739 ATAD5Q96QE3 1844 aa14.11□□□□□ -0.15
MRPL55-212ENST00000366739 BACE1P56817 501 aa14.11□□□□□ -0.15
MRPL55-212ENST00000366739 SHROOM1Q2M3G4 852 aaPredicted RBP14.11□□□□□ -0.15
MRPL55-212ENST00000366739 LRIT3Q3SXY7 679 aa14.11□□□□□ -0.15
MRPL55-212ENST00000366739 GORABQ5T7V8 394 aa14.11□□□□□ -0.15
MRPL55-212ENST00000366739 TDHQ8IZJ6 230 aa14.11□□□□□ -0.15
MRPL55-212ENST00000366739 WDR18Q9BV38 432 aa14.11□□□□□ -0.15
MRPL55-212ENST00000366739 CUL9Q8IWT3 2517 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 ZNF316A6NFI3 1004 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-212ENST00000366739 ARID4AP29374 1257 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-212ENST00000366739 HOXA7P31268 230 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-212ENST00000366739 MCAMP43121 646 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 HERVK_113P62684 666 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 TRMT2AQ8IZ69 625 aaKnown RBP14.1□□□□□ -0.15
MRPL55-212ENST00000366739 GPRC5AQ8NFJ5 357 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 SOCS4Q8WXH5 440 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 NUDT12Q9BQG2 462 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 UBE2OQ9C0C9 1292 aaKnown RBP14.1□□□□□ -0.15
MRPL55-212ENST00000366739 DNAJC18Q9H819 358 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 TMOD4Q9NZQ9 345 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 PI4KBQ9UBF8 816 aa14.1□□□□□ -0.15
MRPL55-212ENST00000366739 SIPA1L1O43166 1804 aa14.09□□□□□ -0.15
MRPL55-212ENST00000366739 XRCC5P13010 732 aaKnown RBP14.09□□□□□ -0.15
MRPL55-212ENST00000366739 ZKSCAN1P17029 563 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-212ENST00000366739 CACNB2Q08289 660 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-212ENST00000366739 MTX1Q13505 466 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms