RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 PDHXO00330 501 aa28.76■■■□□ 2.19
SHC1-201ENST00000366442 MLLT1Q03111 559 aaPredicted RBP28.76■■■□□ 2.19
SHC1-201ENST00000366442 FASTKD5Q7L8L6 764 aaKnown RBP28.76■■■□□ 2.19
SHC1-201ENST00000366442 PRRT2Q7Z6L0 340 aaPredicted RBP28.76■■■□□ 2.19
SHC1-201ENST00000366442 MAGEB6Q8N7X4 407 aa28.76■■■□□ 2.19
SHC1-201ENST00000366442 PHIPQ8WWQ0 1821 aa28.76■■■□□ 2.19
SHC1-201ENST00000366442 FAM196BA6NMK8 535 aa28.75■■■□□ 2.19
SHC1-201ENST00000366442 MAPKAPK5Q8IW41 473 aa28.75■■■□□ 2.19
SHC1-201ENST00000366442 PTPN22Q9Y2R2 807 aa28.75■■■□□ 2.19
SHC1-201ENST00000366442 CAP1Q01518 475 aa28.74■■■□□ 2.19
SHC1-201ENST00000366442 METTL16Q86W50 562 aaKnown RBP28.74■■■□□ 2.19
SHC1-201ENST00000366442 DYNLL1P63167 89 aaKnown RBP28.73■■■□□ 2.19
SHC1-201ENST00000366442 GPAT2Q6NUI2 795 aa28.73■■■□□ 2.19
SHC1-201ENST00000366442 C17orf99Q6UX52 265 aa28.73■■■□□ 2.19
SHC1-201ENST00000366442 TBC1D2Q9BYX2 928 aa28.73■■■□□ 2.19
SHC1-201ENST00000366442 SIPA1L1O43166 1804 aa28.73■■■□□ 2.19
SHC1-201ENST00000366442 PTPRFP10586 1907 aa28.73■■■□□ 2.19
SHC1-201ENST00000366442 ADGRA2Q96PE1 1338 aa28.72■■■□□ 2.19
SHC1-201ENST00000366442 CAP2P40123 477 aa28.72■■■□□ 2.19
SHC1-201ENST00000366442 SOX10P56693 466 aa28.72■■■□□ 2.19
SHC1-201ENST00000366442 FOXP4Q8IVH2 680 aaPredicted RBP28.72■■■□□ 2.19
SHC1-201ENST00000366442 MIGA1Q8NAN2 632 aa28.72■■■□□ 2.19
SHC1-201ENST00000366442 PARK7Q99497 189 aaKnown RBP28.72■■■□□ 2.19
SHC1-201ENST00000366442 SLC45A1Q9Y2W3 748 aa28.72■■■□□ 2.19
SHC1-201ENST00000366442 LACTBP83111 547 aaPredicted RBP28.71■■■□□ 2.19
SHC1-201ENST00000366442 KIF22Q14807 665 aa28.71■■■□□ 2.19
SHC1-201ENST00000366442 LRRCC1Q9C099 1032 aa28.7■■■□□ 2.18
SHC1-201ENST00000366442 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.7■■■□□ 2.18
SHC1-201ENST00000366442 ATAD5Q96QE3 1844 aa28.7■■■□□ 2.18
SHC1-201ENST00000366442 TRIM75PA6NK02 468 aa28.69■■■□□ 2.18
SHC1-201ENST00000366442 GNRH1P01148 92 aa28.69■■■□□ 2.18
SHC1-201ENST00000366442 RRP1BQ14684 758 aaKnown RBP28.69■■■□□ 2.18
SHC1-201ENST00000366442 PALD1Q9ULE6 856 aa28.69■■■□□ 2.18
SHC1-201ENST00000366442 HLA-DOAP06340 250 aa28.68■■■□□ 2.18
SHC1-201ENST00000366442 ATP5JP18859 108 aa28.68■■■□□ 2.18
SHC1-201ENST00000366442 DNAJC2Q99543 621 aaKnown RBP28.68■■■□□ 2.18
SHC1-201ENST00000366442 CPA4Q9UI42 421 aa28.68■■■□□ 2.18
SHC1-201ENST00000366442 CENPFP49454 3210 aa28.68■■■□□ 2.18
SHC1-201ENST00000366442 GOLIM4O00461 696 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 PDE6AP16499 860 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 USP5P45974 858 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 SLC9C2Q5TAH2 1124 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 GADL1Q6ZQY3 521 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 CCDC84Q86UT8 332 aaPredicted RBP28.67■■■□□ 2.18
SHC1-201ENST00000366442 CRACR2BQ8N4Y2 399 aaPredicted RBP28.67■■■□□ 2.18
SHC1-201ENST00000366442 ZNF280CQ8ND82 737 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 RIOK1Q9BRS2 568 aaKnown RBP28.67■■■□□ 2.18
SHC1-201ENST00000366442 TRIM34Q9BYJ4 488 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 DNAJC18Q9H819 358 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 GINM1Q9NU53 330 aa28.67■■■□□ 2.18
SHC1-201ENST00000366442 USP17L5A8MUK1 530 aa28.66■■■□□ 2.18
SHC1-201ENST00000366442 ARMC5Q96C12 935 aa28.66■■■□□ 2.18
SHC1-201ENST00000366442 ARHGAP39Q9C0H5 1083 aa28.66■■■□□ 2.18
SHC1-201ENST00000366442 BCL11AQ9H165 835 aa28.66■■■□□ 2.18
SHC1-201ENST00000366442 SAP30BPQ9UHR5 308 aaKnown RBP28.66■■■□□ 2.18
SHC1-201ENST00000366442 MYH1P12882 1939 aa28.66■■■□□ 2.18
SHC1-201ENST00000366442 ASNSP08243 561 aa28.65■■■□□ 2.18
SHC1-201ENST00000366442 CYP2C8P10632 490 aa28.65■■■□□ 2.18
SHC1-201ENST00000366442 PROCA1Q8NCQ7 364 aaPredicted RBP28.65■■■□□ 2.18
SHC1-201ENST00000366442 DCTPP1Q9H773 170 aa28.65■■■□□ 2.18
SHC1-201ENST00000366442 AS3MTQ9HBK9 375 aa28.65■■■□□ 2.18
SHC1-201ENST00000366442 PAG1Q9NWQ8 432 aa28.65■■■□□ 2.18
SHC1-201ENST00000366442 AGTPBP1Q9UPW5 1226 aa28.65■■■□□ 2.18
SHC1-201ENST00000366442 MAGEB6P1A0A0J9YX57 407 aa28.64■■■□□ 2.18
SHC1-201ENST00000366442 BCRP11274 1271 aa28.64■■■□□ 2.18
SHC1-201ENST00000366442 SPP2Q13103 211 aa28.64■■■□□ 2.18
SHC1-201ENST00000366442 HAUS7Q99871 368 aa28.64■■■□□ 2.18
SHC1-201ENST00000366442 BOLA2Q9H3K6 86 aa28.64■■■□□ 2.18
SHC1-201ENST00000366442 PRMT2P55345 433 aa28.63■■■□□ 2.17
SHC1-201ENST00000366442 WDR18Q9BV38 432 aa28.63■■■□□ 2.17
SHC1-201ENST00000366442 EHD4Q9H223 541 aa28.63■■■□□ 2.17
SHC1-201ENST00000366442 ZNF532Q9HCE3 1301 aa28.63■■■□□ 2.17
SHC1-201ENST00000366442 LOC285556D6RIA3 1793 aa28.62■■■□□ 2.17
SHC1-201ENST00000366442 ZSWIM8A7E2V4 1837 aa28.62■■■□□ 2.17
SHC1-201ENST00000366442 TCRBV5S4A2TA0A5A2 114 aa28.62■■■□□ 2.17
SHC1-201ENST00000366442 TNRC18O15417 2968 aaPredicted RBP28.62■■■□□ 2.17
SHC1-201ENST00000366442 RRP1P56182 461 aaKnown RBP28.62■■■□□ 2.17
SHC1-201ENST00000366442 EDC3Q96F86 508 aaKnown RBP28.62■■■□□ 2.17
SHC1-201ENST00000366442 PTCH2Q9Y6C5 1203 aa28.62■■■□□ 2.17
SHC1-201ENST00000366442 SMARCA5O60264 1052 aaPredicted RBP28.61■■■□□ 2.17
SHC1-201ENST00000366442 SH3D19Q5HYK7 790 aa28.61■■■□□ 2.17
SHC1-201ENST00000366442 TTC6Q86TZ1 520 aa28.61■■■□□ 2.17
SHC1-201ENST00000366442 SERPINB13Q9UIV8 391 aa28.61■■■□□ 2.17
SHC1-201ENST00000366442 PSMC4P43686 418 aa28.6■■■□□ 2.17
SHC1-201ENST00000366442 CRNKL1Q9BZJ0 848 aaKnown RBP28.6■■■□□ 2.17
SHC1-201ENST00000366442 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.6■■■□□ 2.171e-6■■■■■ 29.2
SHC1-201ENST00000366442 PNMA3Q9UL41 463 aa28.6■■■□□ 2.17
SHC1-201ENST00000366442 DDX60LQ5H9U9 1706 aaKnown RBP28.6■■■□□ 2.17
SHC1-201ENST00000366442 CTGFP29279 349 aa28.59■■■□□ 2.17
SHC1-201ENST00000366442 HMGCS2P54868 508 aa28.59■■■□□ 2.17
SHC1-201ENST00000366442 JAG1P78504 1218 aa28.59■■■□□ 2.17
SHC1-201ENST00000366442 TREML2Q5T2D2 321 aa28.59■■■□□ 2.17
SHC1-201ENST00000366442 TATDN1Q6P1N9 297 aa28.59■■■□□ 2.17
SHC1-201ENST00000366442 NBPF11Q86T75 865 aa28.59■■■□□ 2.17
SHC1-201ENST00000366442 TRIM47Q96LD4 638 aa28.59■■■□□ 2.17
SHC1-201ENST00000366442 HOXD10P28358 340 aa28.58■■■□□ 2.17
SHC1-201ENST00000366442 ADD2P35612 726 aa28.58■■■□□ 2.17
SHC1-201ENST00000366442 PABPC4Q13310 644 aaKnown RBP eCLIP28.58■■■□□ 2.17
SHC1-201ENST00000366442 SLC4A8Q2Y0W8 1093 aa28.58■■■□□ 2.17
SHC1-201ENST00000366442 SLC9C1Q4G0N8 1177 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms