RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■■■□□ 17.4
TNFRSF1A-202ENST00000366159 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ZSWIM8A7E2V4 1837 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 CTGFP29279 349 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 TMED8Q6PL24 325 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 DHX36Q9H2U1 1008 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 IL1RAPL2Q9NP60 686 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PI4KBQ9UBF8 816 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 FLT1P17948 1338 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CAP2P40123 477 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 ARHGEF6Q15052 776 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 TGFBRAP1Q8WUH2 860 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 NOL10Q9BSC4 688 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 SLC45A1Q9Y2W3 748 aa16.7■□□□□ 0.26
TNFRSF1A-202ENST00000366159 HMMRO75330 724 aa16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 GNRH1P01148 92 aa16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 BCRP11274 1271 aa16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CYP7A1P22680 504 aa16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 MKI67P46013 3256 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 DYNLL1P63167 89 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 DNAJC18Q9H819 358 aa16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CPA4Q9UI42 421 aa16.69■□□□□ 0.26
TNFRSF1A-202ENST00000366159 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 RBBP6Q7Z6E9 1792 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 RAB11FIP3O75154 756 aa16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 IDH1O75874 414 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CYP2C8P10632 490 aa16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 FOXP4Q8IVH2 680 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 MAPKAPK5Q8IW41 473 aa16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CLASRPQ8N2M8 674 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PTCH2Q9Y6C5 1203 aa16.68■□□□□ 0.26
TNFRSF1A-202ENST00000366159 TRIM75PA6NK02 468 aa16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 JAG1P78504 1218 aa16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 CERS3Q8IU89 383 aa16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 MAGEB6Q8N7X4 407 aa16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 ZNF333Q96JL9 665 aa16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PARK7Q99497 189 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PALD1Q9ULE6 856 aa16.67■□□□□ 0.26
TNFRSF1A-202ENST00000366159 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 POTEFA5A3E0 1075 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PRMT2P55345 433 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 KIF22Q14807 665 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 SH3D19Q5HYK7 790 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PROCA1Q8NCQ7 364 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 ZNF280CQ8ND82 737 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 AGTPBP1Q9UPW5 1226 aa16.66■□□□□ 0.26
TNFRSF1A-202ENST00000366159 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
TNFRSF1A-202ENST00000366159 PSMC4P43686 418 aa16.65■□□□□ 0.26
TNFRSF1A-202ENST00000366159 SPP2Q13103 211 aa16.65■□□□□ 0.26
TNFRSF1A-202ENST00000366159 TTF1Q15361 905 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-202ENST00000366159 GADL1Q6ZQY3 521 aa16.65■□□□□ 0.26
TNFRSF1A-202ENST00000366159 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
TNFRSF1A-202ENST00000366159 WDR18Q9BV38 432 aa16.65■□□□□ 0.26
TNFRSF1A-202ENST00000366159 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
TNFRSF1A-202ENST00000366159 APBB1O00213 710 aa16.64■□□□□ 0.25
TNFRSF1A-202ENST00000366159 TREML2Q5T2D2 321 aa16.64■□□□□ 0.25
TNFRSF1A-202ENST00000366159 SRRDQ9UH36 339 aa16.64■□□□□ 0.25
TNFRSF1A-202ENST00000366159 MYH1P12882 1939 aa16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 PDE6AP16499 860 aa16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 OSBPP22059 807 aa16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 SHROOM1Q2M3G4 852 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 TATDN1Q6P1N9 297 aa16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 GINM1Q9NU53 330 aa16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 SAP30BPQ9UHR5 308 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-202ENST00000366159 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 MGAMO43451 1857 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 ASNSP08243 561 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 ATP5JP18859 108 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 SLC9C1Q4G0N8 1177 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 SLC9C2Q5TAH2 1124 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 NBPF11Q86T75 865 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 EHD4Q9H223 541 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 PDE4DIPQ5VU43 2346 aa16.62■□□□□ 0.25
TNFRSF1A-202ENST00000366159 GOLIM4O00461 696 aa16.61■□□□□ 0.25
TNFRSF1A-202ENST00000366159 HLA-DOAP06340 250 aa16.61■□□□□ 0.25
TNFRSF1A-202ENST00000366159 HMGCS2P54868 508 aa16.61■□□□□ 0.25
TNFRSF1A-202ENST00000366159 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-202ENST00000366159 AS3MTQ9HBK9 375 aa16.61■□□□□ 0.25
TNFRSF1A-202ENST00000366159 KIAA0100Q14667 2235 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 HOXD10P28358 340 aa16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 USP5P45974 858 aa16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 BACE1P56817 501 aa16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 CRACR2BQ8N4Y2 399 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 SH3TC2Q8TF17 1288 aa16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 HAUS7Q99871 368 aa16.6■□□□□ 0.25
TNFRSF1A-202ENST00000366159 ZNF532Q9HCE3 1301 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms