RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 LRWD1Q9UFC0 647 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 PLCB3Q01970 1234 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 SNX29Q8TEQ0 813 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 PAGR1Q9BTK6 254 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 DSCC1Q9BVC3 393 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 PUS3Q9BZE2 481 aaKnown RBP20.89■□□□□ 0.93
CLIP2-202ENST00000361545 POTEB2H3BUK9 544 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 PLCD3Q8N3E9 789 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 CEP83Q9Y592 693 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 IKBKGQ9Y6K9 419 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 SHTN1A0MZ66 631 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 POLR2DO15514 142 aaKnown RBP20.88■□□□□ 0.93
CLIP2-202ENST00000361545 SMC1AQ14683 1233 aaKnown RBP20.88■□□□□ 0.93
CLIP2-202ENST00000361545 CCDC50Q8IVM0 306 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 JAK2O60674 1132 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 KRT25Q7Z3Z0 450 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 CMTR1Q8N1G2 835 aaKnown RBP20.88■□□□□ 0.93
CLIP2-202ENST00000361545 IFT74Q96LB3 600 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 RAD51AP2Q09MP3 1159 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 SELENOOQ9BVL4 669 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 PRR36Q9H6K5 1346 aa20.88■□□□□ 0.93
CLIP2-202ENST00000361545 A0A0D9SFI3 127 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 IL6STP40189 918 aaPredicted RBP20.87■□□□□ 0.93
CLIP2-202ENST00000361545 TTC12Q9H892 705 aaPredicted RBP20.87■□□□□ 0.93
CLIP2-202ENST00000361545 CCDC175P0C221 793 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 BTDP43251 543 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 IFNL3Q8IZI9 196 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 ZNF804BA4D1E1 1349 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 EPB41P11171 864 aaKnown RBP20.87■□□□□ 0.93
CLIP2-202ENST00000361545 TERF1P54274 439 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 LUC7L2Q9Y383 392 aaKnown RBP20.87■□□□□ 0.93
CLIP2-202ENST00000361545 MYOM2P54296 1465 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 KRT83P78385 493 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 AZI2Q9H6S1 392 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 CTR9Q6PD62 1173 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 GIGYF2Q6Y7W6 1299 aaKnown RBP20.87■□□□□ 0.93
CLIP2-202ENST00000361545 LZTS2Q9BRK4 669 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 IGSF1Q8N6C5 1336 aa20.87■□□□□ 0.93
CLIP2-202ENST00000361545 USP6P35125 1406 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 KRT5P13647 590 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 GUCA1BQ9UMX6 200 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 SERPINB2P05120 415 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 PHKA1P46020 1223 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 ERBB3P21860 1342 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 PRPHP41219 470 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 MYL5Q02045 173 aa20.86■□□□□ 0.93
CLIP2-202ENST00000361545 NOC4LQ9BVI4 516 aaKnown RBP20.86■□□□□ 0.93
CLIP2-202ENST00000361545 FRMPD2Q68DX3 1309 aaPredicted RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 CKAP4Q07065 602 aaKnown RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 DYMQ7RTS9 669 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 GSTA5Q7RTV2 222 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 CGNQ9P2M7 1197 aaKnown RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 BLMP54132 1417 aaPredicted RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 KRT86O43790 486 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 STRN3Q13033 797 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 PPP2R5BQ15173 497 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 CALCRLQ16602 461 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 APBB1IPQ7Z5R6 666 aaPredicted RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 ZNF654Q8IZM8 581 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 PLEKHF1Q96S99 279 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 LZTFL1Q9NQ48 299 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 TTC37Q6PGP7 1564 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 AATKQ6ZMQ8 1374 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 PABPN1LA6NDY0 278 aaKnown RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 KARSQ15046 597 aaKnown RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 REXO1Q8N1G1 1221 aaKnown RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 LRRC47Q8N1G4 583 aaKnown RBP20.85■□□□□ 0.93
CLIP2-202ENST00000361545 TBC1D7Q9P0N9 293 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 CTAGE15A4D2H0 777 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 CTAGE8P0CG41 777 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 HSPA4P34932 840 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 WDR44Q5JSH3 913 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 CTAGE6Q86UF2 777 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 CTAGE4Q8IX94 777 aa20.85■□□□□ 0.93
CLIP2-202ENST00000361545 PPEF1O14829 653 aaPredicted RBP20.84■□□□□ 0.93
CLIP2-202ENST00000361545 PDE8BO95263 885 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 LMBR1Q8WVP7 490 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 ADORA1P30542 326 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 CNNM4Q6P4Q7 775 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 MAGI2Q86UL8 1455 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
CLIP2-202ENST00000361545 MSANTD4Q8NCY6 345 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 VPS16Q9H269 839 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 SEC31BQ9NQW1 1179 aa20.84■□□□□ 0.93
CLIP2-202ENST00000361545 ERCC3P19447 782 aa20.83■□□□□ 0.93
CLIP2-202ENST00000361545 HERC4Q5GLZ8 1057 aaPredicted RBP20.83■□□□□ 0.93
CLIP2-202ENST00000361545 CHURC1Q8WUH1 139 aa20.83■□□□□ 0.93
CLIP2-202ENST00000361545 SMCO2A6NFE2 343 aa20.83■□□□□ 0.93
CLIP2-202ENST00000361545 CBX1P83916 185 aa20.83■□□□□ 0.93
CLIP2-202ENST00000361545 ERFEQ4G0M1 354 aa20.83■□□□□ 0.93
CLIP2-202ENST00000361545 TSNARE1Q96NA8 513 aa20.83■□□□□ 0.93
CLIP2-202ENST00000361545 TRIM6Q9C030 488 aaPredicted RBP20.83■□□□□ 0.93
CLIP2-202ENST00000361545 PTH1RQ03431 593 aa20.83■□□□□ 0.93
CLIP2-202ENST00000361545 CERKLQ49MI3 558 aaPredicted RBP20.83■□□□□ 0.93
CLIP2-202ENST00000361545 DKC1O60832 514 aaKnown RBP eCLIP20.83■□□□□ 0.923e-8■■■■■ 29.5
CLIP2-202ENST00000361545 TBC1D8BQ0IIM8 1120 aa20.83■□□□□ 0.92
CLIP2-202ENST00000361545 ZSCAN10Q96SZ4 725 aaPredicted RBP20.83■□□□□ 0.92
CLIP2-202ENST00000361545 DNM3Q9UQ16 869 aa20.83■□□□□ 0.92
CLIP2-202ENST00000361545 ERVK-7P63135 1459 aa20.83■□□□□ 0.92
CLIP2-202ENST00000361545 KIF4AO95239 1232 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms