RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 EEF2P13639 858 aaKnown RBP23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 TYRO3Q06418 890 aa23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 PIK3AP1Q6ZUJ8 805 aa23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 MAP3K15Q6ZN16 1313 aa23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 ARID5AQ03989 594 aa23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 FAM227BQ96M60 508 aa23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 DSCC1Q9BVC3 393 aa23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 BCL2L12Q9HB09 334 aa23.06■■□□□ 1.28
NCKAP1-201ENST00000360982 PABPC4Q13310 644 aaKnown RBP eCLIP23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 EAPPQ56P03 285 aaPredicted RBP23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 PLIN2Q99541 437 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 LUC7L2Q9Y383 392 aaKnown RBP23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 CCDC169A6NNP5 214 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 CCDC175P0C221 793 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 STX17P56962 302 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 CCDC77Q9BR77 488 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 UBXN1Q04323 297 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 STRN3Q13033 797 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 AKNAD1Q5T1N1 836 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 MCTP2Q6DN12 878 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 CNNM4Q6P4Q7 775 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 SREK1Q8WXA9 508 aaKnown RBP23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 KDRP35968 1356 aa23.05■■□□□ 1.28
NCKAP1-201ENST00000360982 KRBA2Q6ZNG9 492 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 CCDC155Q8N6L0 562 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 CHMP2AO43633 222 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 ERO1AQ96HE7 468 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 SPC25Q9HBM1 224 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 FAM160A1Q05DH4 1040 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 CDAN1Q8IWY9 1227 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 DNM2P50570 870 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 ANO1Q5XXA6 986 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 NLRP1Q9C000 1473 aa23.04■■□□□ 1.28
NCKAP1-201ENST00000360982 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 TTLL7Q6ZT98 887 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 TTC16Q8NEE8 873 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 PLCB3Q01970 1234 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 UBE4AQ14139 1066 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 TTC38Q5R3I4 469 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 UTP14CQ5TAP6 766 aaKnown RBP23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 WDR17Q8IZU2 1322 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 STX10O60499 249 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 CCNT1O60563 726 aaKnown RBP23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 TXKP42681 527 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 MAATS1Q7Z4T9 603 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 AATKQ6ZMQ8 1374 aa23.03■■□□□ 1.28
NCKAP1-201ENST00000360982 FAM135BQ49AJ0 1406 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 OTUD7AQ8TE49 926 aaPredicted RBP23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 LRWD1Q9UFC0 647 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 CFBP00751 764 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 ARHGAP27Q6ZUM4 889 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 SULF1Q8IWU6 871 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 CTAGE15A4D2H0 777 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 CTAGE8P0CG41 777 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 CTAGE6Q86UF2 777 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 CTAGE4Q8IX94 777 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 SSH3Q8TE77 659 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 HARSP12081 509 aaKnown RBP23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 ARID4AP29374 1257 aaPredicted RBP23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
NCKAP1-201ENST00000360982 CETN3O15182 167 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 PDE4DQ08499 809 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 DCAF17Q5H9S7 520 aaPredicted RBP23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 CPA1P15085 419 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 MYL5Q02045 173 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 PPP1R14CQ8TAE6 165 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 METP08581 1390 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 FERP16591 822 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 CEP112Q8N8E3 955 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 USP44Q9H0E7 712 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 SNX14Q9Y5W7 946 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 USP17L12C9JPN9 530 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 USP17L21D6R901 530 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 REXO1Q8N1G1 1221 aaKnown RBP23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 KIFAP3Q92845 792 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 TRIM6Q9C030 488 aaPredicted RBP23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 ATP6V0A2Q9Y487 856 aa23.01■■□□□ 1.27
NCKAP1-201ENST00000360982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.274e-22■■■□□ 17.7
NCKAP1-201ENST00000360982 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 GINS2Q9Y248 185 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
NCKAP1-201ENST00000360982 CTDSPL2Q05D32 466 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 VWA3BQ502W6 1294 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 VPS18Q9P253 973 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 DNM3Q9UQ16 869 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 KCNQ3O43525 872 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 CUTAO60888 179 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 M0QZ92 97 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 PPARAQ07869 468 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 GNPTABQ3T906 1256 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 CNGA4Q8IV77 575 aa23■■□□□ 1.27
NCKAP1-201ENST00000360982 SNX16P57768 344 aa22.99■■□□□ 1.27
NCKAP1-201ENST00000360982 NLRX1Q86UT6 975 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms