RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 USP40Q9NVE5 1235 aa24.65■■□□□ 1.54
MAP1LC3A-201ENST00000360668 BRPF3Q9ULD4 1205 aa24.65■■□□□ 1.54
MAP1LC3A-201ENST00000360668 NFKBIEO00221 500 aa24.64■■□□□ 1.54
MAP1LC3A-201ENST00000360668 MYH1P12882 1939 aa24.64■■□□□ 1.53
MAP1LC3A-201ENST00000360668 POLR3DP05423 398 aaPredicted RBP24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 PKP1Q13835 747 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 CDC42EP5Q6NZY7 148 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 NAP1L2Q9ULW6 460 aaPredicted RBP24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 ECM29Q5VYK3 1845 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 ERICH2A1L162 156 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 PSMD14O00487 310 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 BRD1O95696 1058 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 EVX2Q03828 476 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 TMTC2Q8N394 836 aa24.63■■□□□ 1.53
MAP1LC3A-201ENST00000360668 GOLGA8BA8MQT2 603 aa24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 RANBP6O60518 1105 aaKnown RBP24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 WDHD1O75717 1129 aaPredicted RBP24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 RAD17O75943 681 aa24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 PDIA4P13667 645 aaKnown RBP24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 UBAC1Q9BSL1 405 aa24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 SAP30BPQ9UHR5 308 aaKnown RBP24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 ZDHHC9Q9Y397 364 aa24.62■■□□□ 1.53
MAP1LC3A-201ENST00000360668 PRDM1O75626 825 aa24.61■■□□□ 1.53
MAP1LC3A-201ENST00000360668 WTAPQ15007 396 aa24.61■■□□□ 1.53
MAP1LC3A-201ENST00000360668 CLEC17AQ6ZS10 378 aa24.61■■□□□ 1.53
MAP1LC3A-201ENST00000360668 SMARCC2Q8TAQ2 1214 aa24.61■■□□□ 1.53
MAP1LC3A-201ENST00000360668 GMLQ99445 158 aa24.61■■□□□ 1.53
MAP1LC3A-201ENST00000360668 ZNF287Q9HBT7 754 aa24.61■■□□□ 1.53
MAP1LC3A-201ENST00000360668 HPS5Q9UPZ3 1129 aa24.61■■□□□ 1.53
MAP1LC3A-201ENST00000360668 PLCD1P51178 756 aa24.6■■□□□ 1.53
MAP1LC3A-201ENST00000360668 CCT2P78371 535 aaKnown RBP24.6■■□□□ 1.53
MAP1LC3A-201ENST00000360668 NFXL1Q6ZNB6 911 aa24.6■■□□□ 1.53
MAP1LC3A-201ENST00000360668 IQCA1Q86XH1 822 aa24.6■■□□□ 1.53
MAP1LC3A-201ENST00000360668 JDP2Q8WYK2 163 aa24.6■■□□□ 1.53
MAP1LC3A-201ENST00000360668 WDR33Q9C0J8 1336 aaKnown RBP24.6■■□□□ 1.53
MAP1LC3A-201ENST00000360668 DHX16O60231 1041 aaKnown RBP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 PDCP20941 246 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 MCM4P33991 863 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 RBM5P52756 815 aaKnown RBP eCLIP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 APOA5Q6Q788 366 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 ZSCAN10Q96SZ4 725 aaPredicted RBP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 SENP2Q9HC62 589 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 CCDC69A6NI79 296 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 SYT1P21579 422 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 HMGN5P82970 282 aaKnown RBP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 SEC23AQ15436 765 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 C16orf86Q6ZW13 317 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 ZNF784Q8NCA9 323 aaPredicted RBP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 NSUN7Q8NE18 718 aaKnown RBP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 AGBL3Q8NEM8 1001 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 GBP4Q96PP9 640 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 ZKSCAN3Q9BRR0 538 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 NCOA5Q9HCD5 579 aaKnown RBP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 DDX4Q9NQI0 724 aaKnown RBP24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 HDAC9Q9UKV0 1011 aa24.59■■□□□ 1.53
MAP1LC3A-201ENST00000360668 TNKSO95271 1327 aa24.58■■□□□ 1.53
MAP1LC3A-201ENST00000360668 STX6O43752 255 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 NPM3O75607 178 aaKnown RBP24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CTDNEP1O95476 244 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 RCAN1P53805 252 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 PICALMQ13492 652 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 SLC4A8Q2Y0W8 1093 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CFAP100Q494V2 611 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 TTC6Q86TZ1 520 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 DYNLL2Q96FJ2 89 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 IDI2Q9BXS1 227 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 OSBPL5Q9H0X9 879 aaPredicted RBP24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 MKNK2Q9HBH9 465 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 SLC12A7Q9Y666 1083 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 NID2Q14112 1375 aa24.58■■□□□ 1.52
MAP1LC3A-201ENST00000360668 ZBTB43O43298 467 aa24.57■■□□□ 1.52
MAP1LC3A-201ENST00000360668 JAK2O60674 1132 aa24.57■■□□□ 1.52
MAP1LC3A-201ENST00000360668 PTMSP20962 102 aa24.57■■□□□ 1.52
MAP1LC3A-201ENST00000360668 METAP2P50579 478 aaKnown RBP eCLIP24.57■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CXCL9Q07325 125 aa24.57■■□□□ 1.52
MAP1LC3A-201ENST00000360668 SYNE3Q6ZMZ3 975 aa24.57■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CIAPIN1Q6FI81 312 aa24.56■■□□□ 1.52
MAP1LC3A-201ENST00000360668 PCDHAC2Q9Y5I4 1007 aa24.56■■□□□ 1.52
MAP1LC3A-201ENST00000360668 PTPDC1A2A3K4 754 aa24.55■■□□□ 1.52
MAP1LC3A-201ENST00000360668 TSPY2A6NKD2 308 aa24.55■■□□□ 1.52
MAP1LC3A-201ENST00000360668 TNIP1Q15025 636 aa24.55■■□□□ 1.52
MAP1LC3A-201ENST00000360668 LARP1BQ659C4 914 aaKnown RBP24.55■■□□□ 1.52
MAP1LC3A-201ENST00000360668 ARHGAP27Q6ZUM4 889 aa24.55■■□□□ 1.52
MAP1LC3A-201ENST00000360668 ENAHQ8N8S7 591 aaPredicted RBP24.55■■□□□ 1.52
MAP1LC3A-201ENST00000360668 KIF3AQ9Y496 699 aa24.55■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CDK8P49336 464 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CCDC178Q5BJE1 867 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 FAM47AQ5JRC9 791 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 ZNF444Q8N0Y2 327 aaPredicted RBP24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 OGFOD1Q8N543 542 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 DDX11L8A8MPP1 907 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 ZSCAN22P10073 491 aaPredicted RBP24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 MMP14P50281 582 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 NFIAQ12857 509 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 IFIT1BQ5T764 474 aaKnown RBP24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 MICU3Q86XE3 530 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 TCP11L1Q9NUJ3 509 aa24.54■■□□□ 1.52
MAP1LC3A-201ENST00000360668 GOLGA8AA7E2F4 631 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CPLX1O14810 134 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 DTNBO60941 627 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms