RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 SPEF2Q9C093 1822 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 GOLGA6L9A6NEM1 432 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 CDKL5O76039 1030 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 ADD2P35612 726 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 MORC3Q14149 939 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 NT5DC1Q5TFE4 455 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
RPE-202ENST00000359429 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 AKAP2Q9Y2D5 859 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 GOLGA8AA7E2F4 631 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 TXLNAP40222 546 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 APTXQ7Z2E3 356 aaKnown RBP12.45□□□□□ -0.42
RPE-202ENST00000359429 NOSTRINQ8IVI9 506 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 TXLNBQ8N3L3 684 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 RGS22Q8NE09 1264 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 GOLGA1Q92805 767 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 PIH1D3Q9NQM4 214 aaKnown RBP12.45□□□□□ -0.42
RPE-202ENST00000359429 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
RPE-202ENST00000359429 PUF60Q9UHX1 559 aaKnown RBP12.45□□□□□ -0.42
RPE-202ENST00000359429 FEZ2Q9UHY8 353 aaPredicted RBP12.45□□□□□ -0.42
RPE-202ENST00000359429 PTPREP23469 700 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 TRIM29Q14134 588 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 CMTR1Q8N1G2 835 aaKnown RBP12.44□□□□□ -0.42
RPE-202ENST00000359429 ANKZF1Q9H8Y5 726 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 SUGCTQ9HAC7 445 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 ADAM21Q9UKJ8 722 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 PCDHB6Q9Y5E3 794 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 MAP2K7O14733 419 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 ABL1P00519 1130 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 NR5A1Q13285 461 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 CPLX2Q6PUV4 134 aaKnown RBP12.44□□□□□ -0.42
RPE-202ENST00000359429 CCDC82Q8N4S0 544 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 CPLX3Q8WVH0 158 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 PNKPQ96T60 521 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
RPE-202ENST00000359429 LCMT1Q9UIC8 334 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 ADGRG1Q9Y653 693 aa12.44□□□□□ -0.42
RPE-202ENST00000359429 TRPM3Q9HCF6 1732 aaPredicted RBP12.44□□□□□ -0.42
RPE-202ENST00000359429 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
RPE-202ENST00000359429 CASP1P29466 404 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 RBL2Q08999 1139 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 DIS3L2Q8IYB7 885 aaKnown RBP12.43□□□□□ -0.42
RPE-202ENST00000359429 ZSWIM5Q9P217 1185 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 WWC3Q9ULE0 1092 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 ZNF532Q9HCE3 1301 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 CCDC151A5D8V7 595 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
RPE-202ENST00000359429 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
RPE-202ENST00000359429 ATP2B1P20020 1258 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 CHMP4BP1P59074 171 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 CTDSPL2Q05D32 466 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 SGMS1Q86VZ5 419 aa12.43□□□□□ -0.42
RPE-202ENST00000359429 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
RPE-202ENST00000359429 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
RPE-202ENST00000359429 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
RPE-202ENST00000359429 AKR1B15C9JRZ8 316 aaPredicted RBP12.42□□□□□ -0.42
RPE-202ENST00000359429 MMP1P03956 469 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
RPE-202ENST00000359429 CCDC175P0C221 793 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 STX17P56962 302 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
RPE-202ENST00000359429 TAF7LQ5H9L4 462 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 BEND6Q5SZJ8 279 aaPredicted RBP12.42□□□□□ -0.42
RPE-202ENST00000359429 WWC2Q6AWC2 1192 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 SRGAP1Q7Z6B7 1085 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 TMEM87BQ96K49 555 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 A0A087X0B3 334 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
RPE-202ENST00000359429 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
RPE-202ENST00000359429 SLC20A2Q08357 652 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 MCM6Q14566 821 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPE-202ENST00000359429 PDE11AQ9HCR9 933 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
RPE-202ENST00000359429 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 RIC1Q4ADV7 1423 aa12.42□□□□□ -0.42
RPE-202ENST00000359429 LMAN1P49257 510 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 METTL24Q5JXM2 366 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 KLHL10Q6JEL2 608 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 CSRNP2Q9H175 543 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 KIF1AQ12756 1690 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
RPE-202ENST00000359429 TRIM66O15016 1216 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 COBLO75128 1261 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 CSF1RP07333 972 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 PDE6AP16499 860 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 PLCD1P51178 756 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 IFIT5Q13325 482 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms