RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 OCLNQ16625 522 aa8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 PRAMEF18Q5VWM3 479 aa8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 PPP1R42Q7Z4L9 355 aa8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 ZNF34Q8IZ26 560 aa8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 HINFPQ9BQA5 517 aa8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 CXXC1Q9P0U4 656 aaPredicted RBP8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 PTPN22Q9Y2R2 807 aa8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 ZSWIM8A7E2V4 1837 aa8.34□□□□□ -1.07
TNFSF11-202ENST00000358545 ERCC3P19447 782 aa8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 GRAPQ13588 217 aa8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 MCM10Q7L590 875 aa8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 TAS1R3Q7RTX0 852 aa8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 GRAPLQ8TC17 118 aaPredicted RBP8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 CD99L2Q8TCZ2 262 aa8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 RRP7AQ9Y3A4 280 aaKnown RBP8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 KNSTRNQ9Y448 316 aa8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 ZNF646O15015 1829 aaPredicted RBP8.34□□□□□ -1.08
TNFSF11-202ENST00000358545 MYL6BP14649 208 aa8.33□□□□□ -1.08
TNFSF11-202ENST00000358545 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
TNFSF11-202ENST00000358545 DDX46Q7L014 1031 aaKnown RBP8.33□□□□□ -1.08
TNFSF11-202ENST00000358545 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
TNFSF11-202ENST00000358545 KCTD15Q96SI1 283 aaPredicted RBP8.33□□□□□ -1.08
TNFSF11-202ENST00000358545 BIN2Q9UBW5 565 aaPredicted RBP8.33□□□□□ -1.08
TNFSF11-202ENST00000358545 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 MYCP01106 439 aaPredicted RBP8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 HCLS1P14317 486 aaPredicted RBP8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 RAB15P59190 212 aa8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 PARP10Q53GL7 1025 aa8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 SLC10A5Q5PT55 438 aa8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 ERO1AQ96HE7 468 aa8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 ZNF333Q96JL9 665 aa8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 UTP14AQ9BVJ6 771 aaKnown RBP8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
TNFSF11-202ENST00000358545 PITPNM2Q9BZ72 1349 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 LGR5O75473 907 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 ABL1P00519 1130 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 VIL1P09327 827 aaKnown RBP8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 MARSP56192 900 aaKnown RBP8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 ZNF280AP59817 542 aaPredicted RBP8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 CAP1Q01518 475 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 TCIRG1Q13488 830 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 PRKG1Q13976 671 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 DCTN1Q14203 1278 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 SLC4A8Q2Y0W8 1093 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 EFCC1Q9HA90 598 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 POLLQ9UGP5 575 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 OTOFQ9HC10 1997 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
TNFSF11-202ENST00000358545 RBM47A0AV96 593 aaKnown RBP8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 IGF2BP3O00425 579 aaKnown RBP eCLIP8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 SOX1O00570 391 aaPredicted RBP8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 GPSM2P81274 684 aa8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 SPRYD7Q5W111 196 aa8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 PPP1R18Q6NYC8 613 aa8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 RTF1Q92541 710 aaKnown RBP8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 MYOZ2Q9NPC6 264 aa8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 MIS18AQ9NYP9 233 aa8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 EGFL7Q9UHF1 273 aa8.3□□□□□ -1.08
TNFSF11-202ENST00000358545 SPEF2Q9C093 1822 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 NF2P35240 595 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 MMRN1Q13201 1228 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 SLC9C1Q4G0N8 1177 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 DPF3Q92784 378 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 EYA3Q99504 573 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 ALPK3Q96L96 1907 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 MANSC4A6NHS7 340 aaPredicted RBP8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 M0R2N6 131 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 TRIM32Q13049 653 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 CRHR2Q13324 411 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 VASH1Q7L8A9 365 aaPredicted RBP8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 ARMC9Q7Z3E5 817 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 AGBL3Q8NEM8 1001 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 CELF1Q92879 486 aaKnown RBP8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 COL25A1Q9BXS0 654 aaPredicted RBP8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 PRO3102Q9H379 93 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 FZD1Q9UP38 647 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 PTCH2Q9Y6C5 1203 aa8.29□□□□□ -1.08
TNFSF11-202ENST00000358545 VCANP13611 3396 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 WTIPA6NIX2 430 aaPredicted RBP8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 WEE1P30291 646 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 SCTRP47872 440 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 NBPF9Q3BBW0 867 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 TBC1D16Q8TBP0 767 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 THUMPD2Q9BTF0 503 aaKnown RBP8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 ANO2Q9NQ90 1003 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 ANGEL1Q9UNK9 670 aaKnown RBP8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 MAP4K5Q9Y4K4 846 aa8.28□□□□□ -1.08
TNFSF11-202ENST00000358545 SH3TC1Q8TE82 1336 aa8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 UNCXA6NJT0 531 aa8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 ICMTO60725 284 aa8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 SKOR1P84550 965 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms