RNA–Protein interactions for RNA: ENST00000358385.10

ATL1-201, Transcript of atlastin GTPase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL1, Length 2,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-201ENST00000358385 RTEL1Q9NZ71 1219 aa11.4□□□□□ -0.58
ATL1-201ENST00000358385 CDC23Q9UJX2 597 aa11.4□□□□□ -0.58
ATL1-201ENST00000358385 ZEB2O60315 1214 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 PDCP20941 246 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 RANBP1P43487 201 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 USP4Q13107 963 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 SPATS2Q86XZ4 545 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 UNC5CLQ8IV45 518 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 CCDC50Q8IVM0 306 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 MAGEC3Q8TD91 643 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 PHAXQ9H814 394 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 PICK1Q9NRD5 415 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 PES1O00541 588 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 CDKL5O76039 1030 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 STIM1Q13586 685 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 PLCB4Q15147 1175 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 ME3Q16798 604 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 PRPF40BQ6NWY9 871 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 CYB5D1Q6P9G0 228 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 TOGARAM2Q6ZUX3 1019 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 TCP11Q8WWU5 503 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 ZSCAN31Q96LW9 406 aaPredicted RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 YIPF3Q9GZM5 350 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 FAM208AQ9UK61 1670 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 SLC8A1P32418 973 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 TUBB4BP68371 445 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 CHRNA2Q15822 529 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 SPATA21Q7Z572 469 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 TMEM139Q8IV31 216 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 CCAR1Q8IX12 1150 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 B4GALNT2Q8NHY0 566 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 NLRP2Q9NX02 1062 aa11.39□□□□□ -0.59
ATL1-201ENST00000358385 BIN2Q9UBW5 565 aaPredicted RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
ATL1-201ENST00000358385 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 MAP4K4O95819 1239 aaPredicted RBP11.38□□□□□ -0.59
ATL1-201ENST00000358385 TFRCP02786 760 aaKnown RBP11.38□□□□□ -0.59
ATL1-201ENST00000358385 TUBBP07437 444 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 IMPDH2P12268 514 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 FANCCQ00597 558 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 SF3B2Q13435 895 aaKnown RBP11.38□□□□□ -0.59
ATL1-201ENST00000358385 PDIA5Q14554 519 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 DPCR1Q3MIW9 517 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 MICALCLQ6ZW33 695 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 YTHDF3Q7Z739 585 aaKnown RBP11.38□□□□□ -0.59
ATL1-201ENST00000358385 BLOC1S6Q9UL45 172 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 TBC1D2BQ9UPU7 963 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 LMOD1P29536 600 aaPredicted RBP11.38□□□□□ -0.59
ATL1-201ENST00000358385 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 TBC1D5Q92609 795 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 HOOK2Q96ED9 719 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 GOLPH3LQ9H4A5 285 aa11.38□□□□□ -0.59
ATL1-201ENST00000358385 TNS3Q68CZ2 1445 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 LMO7Q8WWI1 1683 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
ATL1-201ENST00000358385 PTPN21Q16825 1174 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 MIS18BP1Q6P0N0 1132 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
ATL1-201ENST00000358385 SLC30A9Q6PML9 568 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 BZW1Q7L1Q6 419 aaKnown RBP11.37□□□□□ -0.59
ATL1-201ENST00000358385 MYLK4Q86YV6 388 aaPredicted RBP11.37□□□□□ -0.59
ATL1-201ENST00000358385 GDAP1L1Q96MZ0 367 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 DESI2Q9BSY9 194 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 TSGA10Q9BZW7 698 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 SALL3Q9BXA9 1300 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 CTAGE15A4D2H0 777 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 HMMRO75330 724 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 GNAI2P04899 355 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 CTAGE8P0CG41 777 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 CSB-PGBD3P0DP91 1061 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 CTAGE6Q86UF2 777 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 CTAGE4Q8IX94 777 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 COG1Q8WTW3 980 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 CHPF2Q9P2E5 772 aa11.37□□□□□ -0.59
ATL1-201ENST00000358385 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 SPDYE3A6NKU9 549 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 AHCYL1O43865 530 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 ANXA1P04083 346 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 FESP07332 822 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 BRINP3Q76B58 766 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 NOA1Q8NC60 698 aaKnown RBP11.36□□□□□ -0.59
ATL1-201ENST00000358385 RAPGEF4Q8WZA2 1011 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 CCDC114Q96M63 670 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 PLEKHG4BQ96PX9 1271 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 AGPSO00116 658 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 ZSCAN9O15535 394 aaPredicted RBP11.36□□□□□ -0.59
ATL1-201ENST00000358385 TOP1P11387 765 aaKnown RBP11.36□□□□□ -0.59
ATL1-201ENST00000358385 NSMCE1Q8WV22 266 aa11.36□□□□□ -0.59
ATL1-201ENST00000358385 JAKMIP1Q96N16 626 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms