RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 TCHHQ07283 1943 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 MEFVO15553 781 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-202ENST00000357710 ZEB2O60315 1214 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.37
PSEN1-202ENST00000357710 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 FAM81BQ96LP2 452 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 ACTR5Q9H9F9 607 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-202ENST00000357710 PAPOLBQ9NRJ5 636 aaKnown RBP12.76□□□□□ -0.37
PSEN1-202ENST00000357710 MYO1FO00160 1098 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 KIAA0825Q8IV33 1275 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 ITGB1BP2Q9UKP3 347 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 BARX2Q9UMQ3 279 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 SKAP2O75563 359 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 RPL13P26373 211 aaKnown RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 CHRNA2Q15822 529 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 THEMIS2Q5TEJ8 643 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 ELOA2Q8IYF1 753 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 CUL5Q93034 780 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 BHMTQ93088 406 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 CHAMP1Q96JM3 812 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 SPAG5Q96R06 1193 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 L1RE1Q9UN81 338 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 CREB3O43889 395 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 ATP6V1G1O75348 118 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 EIF4BP23588 611 aaKnown RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 ACTN3Q08043 901 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 CLIC6Q96NY7 704 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-202ENST00000357710 GMEB1Q9Y692 573 aa12.75□□□□□ -0.37
PSEN1-202ENST00000357710 FRMD3A2A2Y4 597 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 UBAP1LF5GYI3 381 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 ZSCAN12O43309 604 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 RHBDL3P58872 404 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 POSTNQ15063 836 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
PSEN1-202ENST00000357710 CCDC92Q53HC0 331 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-202ENST00000357710 E4F1Q66K89 784 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-202ENST00000357710 FCHSD1Q86WN1 690 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 CEP57Q86XR8 500 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 MSANTD4Q8NCY6 345 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 TSC22D3Q99576 134 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 LRRC37A3O60309 1634 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 LUC7L3O95232 432 aaKnown RBP12.74□□□□□ -0.37
PSEN1-202ENST00000357710 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 PPP2R3AQ06190 1150 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 MPP3Q13368 585 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 AKNAD1Q5T1N1 836 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 C16orf87Q6PH81 154 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
PSEN1-202ENST00000357710 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 MPHOSPH6Q99547 160 aaKnown RBP12.74□□□□□ -0.37
PSEN1-202ENST00000357710 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 TMEM165Q9HC07 324 aa12.74□□□□□ -0.37
PSEN1-202ENST00000357710 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
PSEN1-202ENST00000357710 ATP5JP18859 108 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 CYP11B2P19099 503 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 USP4Q13107 963 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 GNL2Q13823 731 aaKnown RBP12.73□□□□□ -0.37
PSEN1-202ENST00000357710 KIAA0753Q2KHM9 967 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 NUGGCQ68CJ6 796 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 SMYD1Q8NB12 490 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 COL5A2P05997 1499 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-202ENST00000357710 URI1O94763 535 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-202ENST00000357710 DESP17661 470 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 TUBB2AQ13885 445 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 BZW1Q7L1Q6 419 aaKnown RBP12.73□□□□□ -0.37
PSEN1-202ENST00000357710 ARMC9Q7Z3E5 817 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 CACTIN-AS1Q8N1I8 211 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-202ENST00000357710 TUBB2BQ9BVA1 445 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 BIN2Q9UBW5 565 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-202ENST00000357710 SWAP70Q9UH65 585 aa12.73□□□□□ -0.37
PSEN1-202ENST00000357710 ABLIM1O14639 778 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 CEP104O60308 925 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 PPFIA1Q13136 1202 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 INF2Q27J81 1249 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 Q4G0T1 1027 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 CCHCR1Q8TD31 782 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-202ENST00000357710 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 HOOK1Q9UJC3 728 aaKnown RBP12.72□□□□□ -0.37
PSEN1-202ENST00000357710 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 RNF40O75150 1001 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 PKN1Q16512 942 aa12.72□□□□□ -0.37
PSEN1-202ENST00000357710 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms