RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
FXR1-202ENST00000357559 TXKP42681 527 aa11.73□□□□□ -0.53
FXR1-202ENST00000357559 SPAG1Q07617 926 aa11.73□□□□□ -0.53
FXR1-202ENST00000357559 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 F13A1P00488 732 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 CALML3P27482 149 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 DYMQ7RTS9 669 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 AMOTL2Q9Y2J4 779 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 NOC2LQ9Y3T9 749 aaKnown RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 KRT81Q14533 505 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 MEIS3Q99687 375 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 NDUFAB1O14561 156 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 RPL13P26373 211 aaKnown RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 COG7P83436 770 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 LMBR1LQ6UX01 489 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 SEPT8Q92599 483 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 METTL14Q9HCE5 456 aaKnown RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 RMDN2Q96LZ7 410 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 SUDS3Q9H7L9 328 aaPredicted RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 CD19P15391 556 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 GNA11P29992 359 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 BRD3Q15059 726 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 MRPL44Q9H9J2 332 aaKnown RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 TRIM56Q9BRZ2 755 aaKnown RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
FXR1-202ENST00000357559 M0QZ92 97 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 CNGA1P29973 690 aa11.72□□□□□ -0.53
FXR1-202ENST00000357559 ADAT2Q7Z6V5 191 aaKnown RBP11.71□□□□□ -0.53
FXR1-202ENST00000357559 ZNF710Q8N1W2 664 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 KIAA1107Q9UPP5 1409 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 CTAGE3PQ8IX95 158 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 STMN1P16949 149 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 TFCP2Q12800 502 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.53
FXR1-202ENST00000357559 POLR2DO15514 142 aaKnown RBP11.71□□□□□ -0.53
FXR1-202ENST00000357559 ATICP31939 592 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 RSAD2Q8WXG1 361 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.53
FXR1-202ENST00000357559 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 ARHGEF35A5YM69 484 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 MYCP01106 439 aaPredicted RBP11.71□□□□□ -0.54
FXR1-202ENST00000357559 MUM1Q2TAK8 710 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 KAZNQ674X7 775 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 JADE1Q6IE81 842 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.54
FXR1-202ENST00000357559 TRAF1Q13077 416 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 KRT12Q99456 494 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 CTTNBP2NLQ9P2B4 639 aa11.71□□□□□ -0.54
FXR1-202ENST00000357559 NELFCDQ8IXH7 590 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 ANLNQ9NQW6 1124 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 TBC1D8BQ0IIM8 1120 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 TAOK1Q7L7X3 1001 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 VGLL3A8MV65 326 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 CEP104O60308 925 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 TSNAXIP1Q2TAA8 658 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 CDAN1Q8IWY9 1227 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 ZCRB1Q8TBF4 217 aaKnown RBP11.7□□□□□ -0.54
FXR1-202ENST00000357559 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 NYXQ9GZU5 481 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
FXR1-202ENST00000357559 hCG_1642624A0A1W2PR95 340 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 VPS41P49754 854 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 AK2P54819 239 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 GABPB2Q8TAK5 448 aaPredicted RBP11.7□□□□□ -0.54
FXR1-202ENST00000357559 MMS19Q96T76 1030 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 HINFPQ9BQA5 517 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 PAGR1Q9BTK6 254 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 CPA1P15085 419 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 DENND2CQ68D51 928 aa11.7□□□□□ -0.54
FXR1-202ENST00000357559 GRM8O00222 908 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 SYNRGQ9UMZ2 1314 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 TNNI1P19237 187 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 CEP128Q6ZU80 1094 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 B4GALNT4Q76KP1 1039 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
FXR1-202ENST00000357559 B4E1Z4 1266 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 KCNA4P22459 653 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 KLHL40Q2TBA0 621 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 NAPGQ99747 312 aaPredicted RBP11.69□□□□□ -0.54
FXR1-202ENST00000357559 RASSF4Q9H2L5 321 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 SLC52A1Q9NWF4 448 aa11.69□□□□□ -0.54
FXR1-202ENST00000357559 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
FXR1-202ENST00000357559 KRT3P12035 628 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms