RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 NUP160Q12769 1436 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 PRIM1P49642 420 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 NLRP9Q7RTR0 991 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 SRRM3A6NNA2 597 aaPredicted RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 RPL13P26373 211 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 RBM6P78332 1123 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 PPP1R7Q15435 360 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 LARP1Q6PKG0 1096 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 ERMNQ8TAM6 284 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 GNAQP50148 359 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 SESN1Q9Y6P5 492 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 BNC1Q01954 994 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 FAM160A1Q05DH4 1040 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 IQCA1Q86XH1 822 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 CCDC197Q8NCU1 140 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 GRK7Q8WTQ7 553 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 MRPS27Q92552 414 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 PALMDQ9NP74 551 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 CIDEBQ9UHD4 219 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 C1orf141Q5JVX7 400 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 MFSD4BQ5TF39 518 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 PSMA8Q8TAA3 256 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 SENP1Q9P0U3 644 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 LAMC2Q13753 1193 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 NEK11Q8NG66 645 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 EPC1Q9H2F5 836 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 GOLGA8JA6NMD2 632 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 TERF2Q15554 542 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 HSP90AA4PQ58FG1 418 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 KRT39Q6A163 491 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 SNX29Q8TEQ0 813 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 STK10O94804 968 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 ZSCAN22P10073 491 aaPredicted RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 BRPF1P55201 1214 aaPredicted RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 CCDC113Q9H0I3 377 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 CD209Q9NNX6 404 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 DIS3Q9Y2L1 958 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 CASKIN1Q8WXD9 1431 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 CASP14P31944 242 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 EPHB4P54760 987 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 SUGP1Q8IWZ8 645 aaKnown RBP5.18□□□□□ -1.58
SYNE2-203ENST00000357395 STK38LQ9Y2H1 464 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 EID1Q9Y6B2 187 aa5.18□□□□□ -1.58
SYNE2-203ENST00000357395 REREQ9P2R6 1566 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 EXOC5O00471 708 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 VPS53Q5VIR6 699 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 DDX21Q9NR30 783 aaKnown RBP eCLIP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 HAUS4Q9H6D7 363 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 VPS52Q8N1B4 723 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 PRR23AA6NEV1 266 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 SNRNP27Q8WVK2 155 aaKnown RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 NLRP7Q8WX94 980 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 MAK16Q9BXY0 300 aaKnown RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 GGA2Q9UJY4 613 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 NOB1Q9ULX3 412 aaKnown RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 TACC3Q9Y6A5 838 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 SLFN5Q08AF3 891 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 IWS1Q96ST2 819 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 POLR3AO14802 1390 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 AKR1B15C9JRZ8 316 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 KRT16P08779 473 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 TTF1Q15361 905 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 RBM20Q5T481 1227 aaKnown RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 NBPF14Q5TI25 921 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 ZNF513Q8N8E2 541 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 N4BP2L2Q92802 583 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CNGA2Q16280 664 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 ZFYVE27Q5T4F4 411 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 ADSLP30566 484 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 SKAP1Q86WV1 359 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 TTC1Q99614 292 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 ARHGAP4P98171 946 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CAPRIN2Q6IMN6 1127 aaKnown RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 TYRO3Q06418 890 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 A0A0G2JS52 829 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 STX10O60499 249 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CNNM3Q8NE01 707 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CHMP7Q8WUX9 453 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 NDEL1Q9GZM8 345 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CAAP1Q9H8G2 361 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 USP40Q9NVE5 1235 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 TXNDC16Q9P2K2 825 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 FGD6Q6ZV73 1430 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CLCN2P51788 898 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 OCA2Q04671 838 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 SERPINB2P05120 415 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 NXNQ6DKJ4 435 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CXorf38Q8TB03 319 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 DDI1Q8WTU0 396 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 ZMYND8Q9ULU4 1186 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-203ENST00000357395 SEMA3EO15041 775 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 SERPINB8P50452 374 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CFAP61Q8NHU2 1237 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CALM1P0DP23 149 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CALM2P0DP24 149 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CALM3P0DP25 149 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 MYL5Q02045 173 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 CTNNAL1Q9UBT7 734 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 SSFA2P28290 1259 aa5.17□□□□□ -1.58
SYNE2-203ENST00000357395 IKBIPQ70UQ0 350 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms