RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 NEURL1BA8MQ27 555 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 TRAF1Q13077 416 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 USP37Q86T82 979 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 NDUFA8P51970 172 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 NOX5Q96PH1 765 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 SAR1BQ9Y6B6 198 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 NEBLO76041 1014 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 A0A1W2PQ27 194 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 A0A1W2PQ64 194 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 A0A1W2PQD8 194 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 TAF5LO75529 589 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 PRDM1O75626 825 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 IL2RBP14784 551 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 RNASE9P60153 205 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 WHAMMP3Q1A5X7 153 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 CCDC25Q86WR0 208 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 CCDC65Q8IXS2 484 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 PLCD3Q8N3E9 789 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 CDC25BP30305 580 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 ADD1P35611 737 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 CALCOCO2Q13137 446 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 OR8K1Q8NGG5 319 aa17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 GIGYF1O75420 1035 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 RPL13P26373 211 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-202ENST00000357207 HSPD1P10809 573 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 VWA3BQ502W6 1294 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 LRRC45Q96CN5 670 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 SYNMO15061 1565 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 ZNF853P0CG23 659 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 GDAP1L1Q96MZ0 367 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 PSMB7Q99436 277 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 TMEM110-MUSTN1A8MSY1 372 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 ATP2A1O14983 1001 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 ZBTB16Q05516 673 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 SLC9C1Q4G0N8 1177 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 NELFBQ8WX92 580 aa17.46■□□□□ 0.39
TRAPPC11-202ENST00000357207 ATP7AQ04656 1500 aa17.46■□□□□ 0.38
TRAPPC11-202ENST00000357207 STX10O60499 249 aa17.46■□□□□ 0.38
TRAPPC11-202ENST00000357207 ATP6V1AP38606 617 aa17.46■□□□□ 0.38
TRAPPC11-202ENST00000357207 CCDC84Q86UT8 332 aaPredicted RBP17.46■□□□□ 0.38
TRAPPC11-202ENST00000357207 IQCGQ9H095 443 aaKnown RBP17.46■□□□□ 0.38
TRAPPC11-202ENST00000357207 ADGBQ8N7X0 1667 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 A1BGP04217 495 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 RUFY4Q6ZNE9 571 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 NOSTRINQ8IVI9 506 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 PPP1R14CQ8TAE6 165 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 SLC52A2Q9HAB3 445 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 KCNK9Q9NPC2 374 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 MTUS1Q9ULD2 1270 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 KCNQ3O43525 872 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 SCRN1Q12765 414 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 PAK2Q13177 524 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 RABGGTAQ92696 567 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 RTEL1Q9NZ71 1219 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 PDIA3P30101 505 aaKnown RBP17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 TRIML1Q8N9V2 468 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 HAUS7Q99871 368 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
TRAPPC11-202ENST00000357207 FAM13AO94988 1023 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 STAMBPO95630 424 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 VIMP08670 466 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 ARHGAP25P42331 645 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 CABS1Q96KC9 395 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 DCAF17Q5H9S7 520 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 SMARCC2Q8TAQ2 1214 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 ATP6V0A2Q9Y487 856 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 SPDYE3A6NKU9 549 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 PPP1R13BQ96KQ4 1090 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 PCDHA5Q9Y5H7 936 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 PLCG2P16885 1265 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 FMNL3Q8IVF7 1028 aa17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 RSRC1Q96IZ7 334 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 NAP1L3Q99457 506 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-202ENST00000357207 A0A1B0GUA9 196 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 CFAP221Q4G0U5 840 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 FCHSD1Q86WN1 690 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 VPS54Q9P1Q0 977 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 C11orf57Q6ZUT1 292 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 BLZF1Q9H2G9 400 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 VGLL3A8MV65 326 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 CETN3O15182 167 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 PLCB3Q01970 1234 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 GSTA5Q7RTV2 222 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 BICD1Q96G01 975 aa17.43■□□□□ 0.38
TRAPPC11-202ENST00000357207 PDLIM2Q96JY6 352 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms