RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 IFIH1Q9BYX4 1025 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 EPS15L1Q9UBC2 864 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 MAP3K5Q99683 1374 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 SEMA3EO15041 775 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 DNM1Q05193 864 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 ZNF569Q5MCW4 686 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 ANO1Q5XXA6 986 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 PAF1Q8N7H5 531 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 EFHD1Q9BUP0 239 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 FAM129AQ9BZQ8 928 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 FAM96AQ9H5X1 160 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 IFNKQ9P0W0 207 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 ANGEL1Q9UNK9 670 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 H0YCG3 227 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 RIOK3O14730 519 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 HOMEZQ8IX15 550 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 NOC2LQ9Y3T9 749 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 SDK1Q7Z5N4 2213 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 LAD1O00515 517 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 TROVE2P10155 538 aaKnown RBP eCLIP7.31□□□□□ -1.248e-10■■■■■ 45.1
VPS13B-202ENST00000357162 C6orf50Q9HD87 102 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 DEXIO95424 95 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 CHMLP26374 656 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 EEF1GP26641 437 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 MRPL40Q9NQ50 206 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 CTTNBP2NLQ9P2B4 639 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 TXNDC16Q9P2K2 825 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 ODF2LQ9ULJ1 636 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 FLT4P35916 1363 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 RGS16O15492 202 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 PPP1R21Q6ZMI0 780 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 HVCN1Q96D96 273 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 DNAJC25Q9H1X3 360 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 SPTAN1Q13813 2472 aaKnown RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 CCDC170Q8IYT3 715 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 BPIFA3Q9BQP9 254 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 TRPM2O94759 1503 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 EPB41P11171 864 aaKnown RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 PHBP35232 272 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 NOTCH3Q9UM47 2321 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 ZEB2O60315 1214 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 RCAN1P53805 252 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 OSCARQ8IYS5 282 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 PIP4K2CQ8TBX8 421 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 IDH1O75874 414 aaKnown RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 NBPF20Q3BBV1 942 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 ANKRD20A3Q5VUR7 823 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 GRK7Q8WTQ7 553 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 ZHX3Q9H4I2 956 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 BCL2L12Q9HB09 334 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 PCDHB15Q9Y5E8 787 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 CDK13Q14004 1512 aaKnown RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 C20orf194Q5TEA3 1177 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 KRT79Q5XKE5 535 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 CAPZA3Q96KX2 299 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 SPTBP11277 2137 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 EP300Q09472 2414 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 ALG1Q9BT22 464 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 OAS2P29728 719 aaKnown RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 PDCD2Q16342 344 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 NT5C3AQ9H0P0 336 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 TMOD4Q9NZQ9 345 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 YWHAEP62258 255 aaKnown RBP7.3□□□□□ -1.24
VPS13B-202ENST00000357162 DBN1Q16643 649 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 SKIDA1Q1XH10 827 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 NRBF2Q96F24 287 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 LMBRD1Q9NUN5 540 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 POLR3EQ9NVU0 708 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 IGSF3O75054 1194 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 GCKP35557 465 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 ANKLE2Q86XL3 938 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 CCDC88CQ9P219 2028 aa7.3□□□□□ -1.24
VPS13B-202ENST00000357162 NLRP12P59046 1061 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 ZRANB1Q9UGI0 708 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 H7C1D1 291 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 RPUSD2Q8IZ73 545 aaKnown RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 GSDMAQ96QA5 445 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 RBM8AQ9Y5S9 174 aaKnown RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 ZWINTO95229 277 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 IRX1P78414 480 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 ARHGAP4P98171 946 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 PRPF4BQ13523 1007 aaKnown RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 OR8K1Q8NGG5 319 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 DDX41Q9UJV9 622 aaKnown RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 SPATA31E1Q6ZUB1 1445 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 GRM8O00222 908 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 PAK1Q13153 545 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 RPS6KA1Q15418 735 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 CEP85Q6P2H3 762 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 HAUS1Q96CS2 278 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 TPCN1Q9ULQ1 816 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 PLCB4Q15147 1175 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 CREB3L3Q68CJ9 461 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 MPNDQ8N594 471 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 PPP4R1Q8TF05 950 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 ARHGEF5Q12774 1597 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 CCDC82Q8N4S0 544 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms