RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 HDLBPQ00341 1268 aaKnown RBP9.4□□□□□ -0.9
COMMD9-202ENST00000355500 IFT88Q13099 833 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 UBE3CQ15386 1083 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 ME3Q16798 604 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 TTC39AQ5SRH9 613 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
COMMD9-202ENST00000355500 FAM184AQ8NB25 1140 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 NLGN2Q8NFZ4 835 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 SMARCC2Q8TAQ2 1214 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 JARID2Q92833 1246 aaPredicted RBP9.4□□□□□ -0.9
COMMD9-202ENST00000355500 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 MTMR6Q9Y217 621 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
COMMD9-202ENST00000355500 NID2Q14112 1375 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 MAST3O60307 1309 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 PDS5AQ29RF7 1337 aaKnown RBP9.4□□□□□ -0.91
COMMD9-202ENST00000355500 IPO5O00410 1097 aaKnown RBP9.4□□□□□ -0.91
COMMD9-202ENST00000355500 STK25O00506 426 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 PFKFB2O60825 505 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 HSPA6P17066 643 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 GJB2P29033 226 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 ABCD1P33897 745 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 EXOSC10Q01780 885 aaKnown RBP9.4□□□□□ -0.91
COMMD9-202ENST00000355500 ST3GAL1Q11201 340 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 ALX1Q15699 326 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 DHX32Q7L7V1 743 aaKnown RBP9.4□□□□□ -0.91
COMMD9-202ENST00000355500 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.91
COMMD9-202ENST00000355500 ABCF2Q9UG63 623 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 TPCN1Q9ULQ1 816 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 ZBTB1Q9Y2K1 713 aa9.4□□□□□ -0.91
COMMD9-202ENST00000355500 SCN4AP35499 1836 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 IRS4O14654 1257 aaPredicted RBP9.39□□□□□ -0.91
COMMD9-202ENST00000355500 CAMTA2O94983 1202 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 BIRC2Q13490 618 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 ITPK1Q13572 414 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
COMMD9-202ENST00000355500 ATP2B3Q16720 1220 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 LPIN2Q92539 896 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 ANKRD31Q8N7Z5 1873 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
COMMD9-202ENST00000355500 PDE8BO95263 885 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 ITGA6P23229 1130 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 TM4SF1P30408 202 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 NT5C2P49902 561 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 PTPROQ16827 1216 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 NAA16Q6N069 864 aaPredicted RBP9.39□□□□□ -0.91
COMMD9-202ENST00000355500 ZSCAN16Q9H4T2 348 aaPredicted RBP9.39□□□□□ -0.91
COMMD9-202ENST00000355500 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
COMMD9-202ENST00000355500 UBN2Q6ZU65 1347 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 HOXA2O43364 376 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 CYP21A2P08686 494 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 HSPD1P10809 573 aaKnown RBP9.38□□□□□ -0.91
COMMD9-202ENST00000355500 ATP6V1AP38606 617 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 IGBP1P78318 339 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 CC2D1AQ6P1N0 951 aaPredicted RBP9.38□□□□□ -0.91
COMMD9-202ENST00000355500 SYTL4Q96C24 671 aaPredicted RBP9.38□□□□□ -0.91
COMMD9-202ENST00000355500 CDC5LQ99459 802 aaKnown RBP9.38□□□□□ -0.91
COMMD9-202ENST00000355500 MUC3BQ9H195 1237 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 SALL1Q9NSC2 1324 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 CTAGE5O15320 804 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 CBFA2T2O43439 604 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
COMMD9-202ENST00000355500 GYS1P13807 737 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 HLFQ16534 295 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 CCDC183Q5T5S1 534 aa9.38□□□□□ -0.91
COMMD9-202ENST00000355500 UTP14AQ9BVJ6 771 aaKnown RBP9.38□□□□□ -0.91
COMMD9-202ENST00000355500 KLHL33A6NCF5 533 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 LARGE1O95461 756 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 CLCN1P35523 988 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 PSMD2Q13200 908 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 SCAND2PQ9GZW5 306 aaPredicted RBP9.37□□□□□ -0.91
COMMD9-202ENST00000355500 NTSR2O95665 410 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 CRKLP46109 303 aaKnown RBP9.37□□□□□ -0.91
COMMD9-202ENST00000355500 TBX4P57082 545 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 LONRF1Q17RB8 773 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 CCDC152Q4G0S7 254 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 METTL24Q5JXM2 366 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
COMMD9-202ENST00000355500 PDLIM2Q96JY6 352 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 PUS3Q9BZE2 481 aaKnown RBP9.37□□□□□ -0.91
COMMD9-202ENST00000355500 TRMT112Q9UI30 125 aaKnown RBP9.37□□□□□ -0.91
COMMD9-202ENST00000355500 THSD7BQ9C0I4 1608 aa9.37□□□□□ -0.91
COMMD9-202ENST00000355500 SLC5A1P13866 664 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 ZNF16P17020 682 aaPredicted RBP9.36□□□□□ -0.91
COMMD9-202ENST00000355500 ADD2P35612 726 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 ABL2P42684 1182 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 TIMM10P62072 90 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 PSMC1P62191 440 aaKnown RBP9.36□□□□□ -0.91
COMMD9-202ENST00000355500 CDC37Q16543 378 aaPredicted RBP9.36□□□□□ -0.91
COMMD9-202ENST00000355500 SLC10A5Q5PT55 438 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 CAVIN1Q6NZI2 390 aaKnown RBP9.36□□□□□ -0.91
COMMD9-202ENST00000355500 GAS2L3Q86XJ1 694 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 FAM89AQ96GI7 184 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 SCYL1Q96KG9 808 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 NCAPGQ9BPX3 1015 aa9.36□□□□□ -0.91
COMMD9-202ENST00000355500 GREM2Q9H772 168 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms