RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 A0A087WWV3 80 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 MBD4O95243 580 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 SPAG1Q07617 926 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 C11orf57Q6ZUT1 292 aaPredicted RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 KIAA1468Q9P260 1216 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 SERPINB2P05120 415 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 LPIN2Q92539 896 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 MRFAP1L1Q96HT8 127 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 KRT40Q6A162 431 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 FAM114A1Q8IWE2 563 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.92□□□□□ -0.18
COLCA1-201ENST00000355430 GUCA1BQ9UMX6 200 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 PRAMEF22A3QJZ6 481 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 HAUS7Q99871 368 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 PCDHA7Q9UN72 937 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 POLR2DO15514 142 aaKnown RBP13.92□□□□□ -0.18
COLCA1-201ENST00000355430 CUTAO60888 179 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 CALM1P0DP23 149 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 CALM2P0DP24 149 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 CALM3P0DP25 149 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 PFKFB1P16118 471 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 EHBP1Q8NDI1 1231 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 FGFR1OPO95684 399 aaKnown RBP13.92□□□□□ -0.18
COLCA1-201ENST00000355430 CCT6AP40227 531 aaKnown RBP13.92□□□□□ -0.18
COLCA1-201ENST00000355430 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 CAPZA3Q96KX2 299 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 EXOC1Q9NV70 894 aa13.92□□□□□ -0.18
COLCA1-201ENST00000355430 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
COLCA1-201ENST00000355430 ZAP70P43403 619 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 UBXN1Q04323 297 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CKAP4Q07065 602 aaKnown RBP13.91□□□□□ -0.18
COLCA1-201ENST00000355430 MTX1Q13505 466 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 PRKG1Q13976 671 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 DCAF15Q66K64 600 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 FTOQ9C0B1 505 aaKnown RBP eCLIP13.91□□□□□ -0.18
COLCA1-201ENST00000355430 ALKQ9UM73 1620 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 KIAA1210Q9ULL0 1709 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 IDEP14735 1019 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CAPN2P17655 700 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 DDIT3P35638 169 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 ERMNQ8TAM6 284 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 ZNF274Q96GC6 653 aaPredicted RBP13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CALML4Q96GE6 196 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 ASAP1Q9ULH1 1129 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CTNND2Q9UQB3 1225 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CDC42BPGQ6DT37 1551 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 NDUFA8P51970 172 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 STXBP4Q6ZWJ1 553 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 IGSF22Q8N9C0 903 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CACTINQ8WUQ7 758 aaKnown RBP13.91□□□□□ -0.18
COLCA1-201ENST00000355430 RSPH14Q9UHP6 348 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 DBNLQ9UJU6 430 aaKnown RBP13.91□□□□□ -0.18
COLCA1-201ENST00000355430 PHACTR2O75167 634 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CYLC1P35663 651 aaPredicted RBP13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CC2D2BQ6DHV5 1058 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 CLIC4Q9Y696 253 aa13.91□□□□□ -0.18
COLCA1-201ENST00000355430 HSPD1P10809 573 aaKnown RBP13.9□□□□□ -0.18
COLCA1-201ENST00000355430 CDC25BP30305 580 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 MCM7P33993 719 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 TMEM87BQ96K49 555 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 NCOA3Q9Y6Q9 1424 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 MAP3K15Q6ZN16 1313 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 PPEF1O14829 653 aaPredicted RBP13.9□□□□□ -0.18
COLCA1-201ENST00000355430 USP8P40818 1118 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 AMPD3Q01432 767 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 ZNF174Q15697 407 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 ERCC6LQ2NKX8 1250 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 CCDC93Q567U6 631 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
COLCA1-201ENST00000355430 TRMT44Q8IYL2 757 aaKnown RBP13.9□□□□□ -0.18
COLCA1-201ENST00000355430 AS3MTQ9HBK9 375 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 OVOS2A0A0J9YW53 1432 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 OVOS2Q6IE36 1432 aa13.9□□□□□ -0.18
COLCA1-201ENST00000355430 CYP21A2P08686 494 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 CTSWP56202 376 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 DIS3L2Q8IYB7 885 aaKnown RBP13.89□□□□□ -0.19
COLCA1-201ENST00000355430 TEKT1Q969V4 418 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 VWA3AA6NCI4 1184 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 RILPL1Q5EBL4 403 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 NFE2L3Q9Y4A8 694 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 SPDYE3A6NKU9 549 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
COLCA1-201ENST00000355430 CCDC40Q4G0X9 1142 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 RRP36Q96EU6 259 aaKnown RBP13.89□□□□□ -0.19
COLCA1-201ENST00000355430 ARHGAP6O43182 974 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 CNGA4Q8IV77 575 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 AKR1B10O60218 316 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 IVLP07476 585 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 IRX3P78415 501 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms