RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 EPB41L4AQ9HCS5 686 aaPredicted RBP16.65■□□□□ 0.26
GFRA1-201ENST00000355422 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
GFRA1-201ENST00000355422 CCDC66A2RUB6 948 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 STX10O60499 249 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 MMP1P03956 469 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 ZNF18P17022 549 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 MAP3K9P80192 1104 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 ELOA2Q8IYF1 753 aaPredicted RBP16.64■□□□□ 0.25
GFRA1-201ENST00000355422 IFNL3Q8IZI9 196 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 MED15Q96RN5 788 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 STK36Q9NRP7 1315 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 PDE8BO95263 885 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 PTPREP23469 700 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 SAFBQ15424 915 aaKnown RBP eCLIP16.64■□□□□ 0.25
GFRA1-201ENST00000355422 SMARCE1Q969G3 411 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 PRDM11Q9NQV5 511 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 SAMSN1Q9NSI8 373 aaKnown RBP16.64■□□□□ 0.25
GFRA1-201ENST00000355422 TNS2Q63HR2 1409 aa16.64■□□□□ 0.25
GFRA1-201ENST00000355422 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
GFRA1-201ENST00000355422 TPM1P09493 284 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 IFNAR1P17181 557 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 SARSP49591 514 aaKnown RBP16.63■□□□□ 0.25
GFRA1-201ENST00000355422 MORC3Q14149 939 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
GFRA1-201ENST00000355422 MLKLQ8NB16 471 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 ENOX1Q8TC92 643 aaKnown RBP16.63■□□□□ 0.25
GFRA1-201ENST00000355422 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 DESI2Q9BSY9 194 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 NAPBQ9H115 298 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 PCDHB6Q9Y5E3 794 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 ATP2B1P20020 1258 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 CTSWP56202 376 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 FAM193AP78312 1265 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 NR5A1Q13285 461 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 NLRP10Q86W26 655 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 HELBQ8NG08 1087 aaPredicted RBP16.63■□□□□ 0.25
GFRA1-201ENST00000355422 WASF1Q92558 559 aa16.63■□□□□ 0.25
GFRA1-201ENST00000355422 GOLGA6L9A6NEM1 432 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
GFRA1-201ENST00000355422 IL2RBP14784 551 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
GFRA1-201ENST00000355422 ALX1Q15699 326 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
GFRA1-201ENST00000355422 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
GFRA1-201ENST00000355422 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 MRFAP1Q9Y605 127 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 ECM29Q5VYK3 1845 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 CDHR2Q9BYE9 1310 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 SASH3O75995 380 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 MBD4O95243 580 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 ARID4AP29374 1257 aaPredicted RBP16.62■□□□□ 0.25
GFRA1-201ENST00000355422 CYP2C19P33261 490 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 PPP2R3AQ06190 1150 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
GFRA1-201ENST00000355422 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
GFRA1-201ENST00000355422 MYO5AQ9Y4I1 1855 aaKnown RBP16.61■□□□□ 0.25
GFRA1-201ENST00000355422 MTF1Q14872 753 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 RILPL1Q5EBL4 403 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 TMOD3Q9NYL9 352 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 RAI14Q9P0K7 980 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 DACH1Q9UI36 760 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 MAP3K15Q6ZN16 1313 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 PAPPAQ13219 1627 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 IRS4O14654 1257 aaPredicted RBP16.61■□□□□ 0.25
GFRA1-201ENST00000355422 NR1I3Q14994 352 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 AKNAD1Q5T1N1 836 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 CC2D1AQ6P1N0 951 aaPredicted RBP16.61■□□□□ 0.25
GFRA1-201ENST00000355422 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 NUTM2AQ8IVF1 878 aaPredicted RBP16.61■□□□□ 0.25
GFRA1-201ENST00000355422 TRIM22Q8IYM9 498 aa16.61■□□□□ 0.25
GFRA1-201ENST00000355422 PRKAB2O43741 272 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 RTN1Q16799 776 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 MFSD6Q6ZSS7 791 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
GFRA1-201ENST00000355422 OXER1Q8TDS5 423 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 IRX2Q9BZI1 471 aaPredicted RBP16.6■□□□□ 0.25
GFRA1-201ENST00000355422 FOXP1Q9H334 677 aaPredicted RBP16.6■□□□□ 0.25
GFRA1-201ENST00000355422 ACTN4O43707 911 aaKnown RBP16.6■□□□□ 0.25
GFRA1-201ENST00000355422 RSRC2Q7L4I2 434 aaKnown RBP16.6■□□□□ 0.25
GFRA1-201ENST00000355422 DHX58Q96C10 678 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 CSRNP2Q9H175 543 aa16.6■□□□□ 0.25
GFRA1-201ENST00000355422 MRPL44Q9H9J2 332 aaKnown RBP16.6■□□□□ 0.25
GFRA1-201ENST00000355422 GSG1L2A8MUP6 293 aa16.59■□□□□ 0.25
GFRA1-201ENST00000355422 SNAP23O00161 211 aa16.59■□□□□ 0.25
GFRA1-201ENST00000355422 SPATA5Q8NB90 893 aa16.59■□□□□ 0.25
GFRA1-201ENST00000355422 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
GFRA1-201ENST00000355422 KRT23Q9C075 422 aa16.59■□□□□ 0.25
GFRA1-201ENST00000355422 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
GFRA1-201ENST00000355422 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.59■□□□□ 0.25
GFRA1-201ENST00000355422 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
GFRA1-201ENST00000355422 SRPRBQ9Y5M8 271 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms