RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 DISP2A7MBM2 1401 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 GLI3P10071 1580 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 KIF2AO00139 706 aaPredicted RBP10.71□□□□□ -0.69
SMG6-202ENST00000354901 ZRANB2O95218 330 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG6-202ENST00000354901 IVLP07476 585 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 ZFYP08048 801 aaPredicted RBP10.71□□□□□ -0.69
SMG6-202ENST00000354901 METAP2P50579 478 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG6-202ENST00000354901 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG6-202ENST00000354901 SUGCTQ9HAC7 445 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 WWC3Q9ULE0 1092 aa10.71□□□□□ -0.69
SMG6-202ENST00000354901 ZNF532Q9HCE3 1301 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 FRMD3A2A2Y4 597 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 IRS4O14654 1257 aaPredicted RBP10.71□□□□□ -0.7
SMG6-202ENST00000354901 RPAINQ86UA6 219 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 ZBTB38Q8NAP3 1195 aaPredicted RBP10.71□□□□□ -0.7
SMG6-202ENST00000354901 TTLL11Q8NHH1 800 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 CLIC6Q96NY7 704 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 ZKSCAN3Q9BRR0 538 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.7
SMG6-202ENST00000354901 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 PUF60Q9UHX1 559 aaKnown RBP10.71□□□□□ -0.7
SMG6-202ENST00000354901 IQSEC3Q9UPP2 1182 aaPredicted RBP10.71□□□□□ -0.7
SMG6-202ENST00000354901 TNS2Q63HR2 1409 aa10.71□□□□□ -0.7
SMG6-202ENST00000354901 ANKRD18BA2A2Z9 1011 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 CAVIN2O95810 425 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 PCCAP05165 728 aaPredicted RBP10.7□□□□□ -0.7
SMG6-202ENST00000354901 SCP2P22307 547 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 ATP2B2Q01814 1243 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 FBXW10Q5XX13 1052 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 ANO1Q5XXA6 986 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 WDHD1O75717 1129 aaPredicted RBP10.7□□□□□ -0.7
SMG6-202ENST00000354901 STARD3NLO95772 234 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 PFKFB1P16118 471 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 GNG11P61952 73 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
SMG6-202ENST00000354901 CMTR1Q8N1G2 835 aaKnown RBP10.7□□□□□ -0.7
SMG6-202ENST00000354901 KCNG4Q8TDN1 519 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 MRFAP1L1Q96HT8 127 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 XPO4Q9C0E2 1151 aaKnown RBP10.7□□□□□ -0.7
SMG6-202ENST00000354901 ZBTB1Q9Y2K1 713 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 NEMFO60524 1076 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 CDC27P30260 824 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 VPS37DQ86XT2 251 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 AIDAQ96BJ3 306 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 NBPF3Q9H094 633 aa10.7□□□□□ -0.7
SMG6-202ENST00000354901 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
SMG6-202ENST00000354901 TOM1O60784 492 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 KRT40Q6A162 431 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 NLRP10Q86W26 655 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 GIMAP7Q8NHV1 300 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 PARD6BQ9BYG5 372 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 CENPHQ9H3R5 247 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 ANGEL1Q9UNK9 670 aaKnown RBP10.69□□□□□ -0.7
SMG6-202ENST00000354901 RIPOR2Q9Y4F9 1068 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 MROH7-TTC4A0A0A0MT08 1334 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 H0YHG0 523 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 ATP1A3P13637 1013 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 ADD2P35612 726 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 BIRC2Q13490 618 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 LRCH2Q5VUJ6 765 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 CCDC102BQ68D86 513 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 PDILTQ8N807 584 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 EXOC4Q96A65 974 aa10.69□□□□□ -0.7
SMG6-202ENST00000354901 UTP14AQ9BVJ6 771 aaKnown RBP10.69□□□□□ -0.7
SMG6-202ENST00000354901 KCPQ6ZWJ8 1503 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 PDE6AP16499 860 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 KARSQ15046 597 aaKnown RBP10.68□□□□□ -0.7
SMG6-202ENST00000354901 LONRF2Q1L5Z9 754 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 TMEM67Q5HYA8 995 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 ATL3Q6DD88 541 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 SARM1Q6SZW1 724 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
SMG6-202ENST00000354901 MMS22LQ6ZRQ5 1243 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 JPH2Q9BR39 696 aaPredicted RBP10.68□□□□□ -0.7
SMG6-202ENST00000354901 SLC26A6Q9BXS9 759 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 GOLGA8AA7E2F4 631 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 TADA3O75528 432 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 SYKP43405 635 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 CTSWP56202 376 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 PNOCQ13519 176 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 MAGEB6Q8N7X4 407 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 GDAP1L1Q96MZ0 367 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 NEDD4P46934 1319 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 IFIT3O14879 490 aaKnown RBP10.68□□□□□ -0.7
SMG6-202ENST00000354901 PRKAB2O43741 272 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 NEBLO76041 1014 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 RHOXF2BP0C7M4 288 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 ETF1P62495 437 aaKnown RBP10.68□□□□□ -0.7
SMG6-202ENST00000354901 PPP2R3AQ06190 1150 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 RHOXF2Q9BQY4 288 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 TEX13AQ9BXU3 409 aaPredicted RBP10.68□□□□□ -0.7
SMG6-202ENST00000354901 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 DONSONQ9NYP3 566 aa10.68□□□□□ -0.7
SMG6-202ENST00000354901 MAP3K15Q6ZN16 1313 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms