RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF280CQ8ND82 737 aa19.79■□□□□ 0.76
DDX55-202ENST00000354291 NUDT12Q9BQG2 462 aa19.79■□□□□ 0.76
DDX55-202ENST00000354291 DDX4Q9NQI0 724 aaKnown RBP19.79■□□□□ 0.76
DDX55-202ENST00000354291 UTYO14607 1347 aa19.78■□□□□ 0.76
DDX55-202ENST00000354291 FAM196BA6NMK8 535 aa19.78■□□□□ 0.76
DDX55-202ENST00000354291 PEX10O60683 326 aa19.78■□□□□ 0.76
DDX55-202ENST00000354291 CACNB2Q08289 660 aaPredicted RBP19.78■□□□□ 0.76
DDX55-202ENST00000354291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.78■□□□□ 0.76
DDX55-202ENST00000354291 EYA2O00167 538 aa19.77■□□□□ 0.76
DDX55-202ENST00000354291 ZKSCAN1P17029 563 aaPredicted RBP19.77■□□□□ 0.76
DDX55-202ENST00000354291 CCND3P30281 292 aaPredicted RBP19.77■□□□□ 0.76
DDX55-202ENST00000354291 LHX8Q68G74 356 aa19.77■□□□□ 0.76
DDX55-202ENST00000354291 WDR63Q8IWG1 891 aa19.77■□□□□ 0.76
DDX55-202ENST00000354291 SENP6Q9GZR1 1112 aaPredicted RBP19.77■□□□□ 0.76
DDX55-202ENST00000354291 SEMA6BQ9H3T3 888 aa19.77■□□□□ 0.76
DDX55-202ENST00000354291 DZIP1Q86YF9 867 aaKnown RBP19.76■□□□□ 0.75
DDX55-202ENST00000354291 DENND2AQ9ULE3 1009 aa19.76■□□□□ 0.75
DDX55-202ENST00000354291 XRCC5P13010 732 aaKnown RBP19.75■□□□□ 0.75
DDX55-202ENST00000354291 BTDP43251 543 aa19.75■□□□□ 0.75
DDX55-202ENST00000354291 IRX3P78415 501 aaPredicted RBP19.75■□□□□ 0.75
DDX55-202ENST00000354291 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
DDX55-202ENST00000354291 CCAR1Q8IX12 1150 aaKnown RBP19.75■□□□□ 0.75
DDX55-202ENST00000354291 GPRC5AQ8NFJ5 357 aa19.75■□□□□ 0.75
DDX55-202ENST00000354291 P2RX7Q99572 595 aaKnown RBP19.75■□□□□ 0.75
DDX55-202ENST00000354291 MORF4L1Q9UBU8 362 aa19.75■□□□□ 0.75
DDX55-202ENST00000354291 ABCF2Q9UG63 623 aa19.75■□□□□ 0.75
DDX55-202ENST00000354291 PRKAG2Q9UGJ0 569 aa19.75■□□□□ 0.75
DDX55-202ENST00000354291 SALL1Q9NSC2 1324 aa19.75■□□□□ 0.75
DDX55-202ENST00000354291 PTPRFP10586 1907 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 TBC1D12O60347 775 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 COL9A1P20849 921 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 PHKA1P46020 1223 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 ATN1P54259 1190 aaPredicted RBP19.74■□□□□ 0.75
DDX55-202ENST00000354291 CCL14Q16627 93 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 ATP2B3Q16720 1220 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 TRMT44Q8IYL2 757 aaKnown RBP19.74■□□□□ 0.75
DDX55-202ENST00000354291 SOCS4Q8WXH5 440 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 MYLIPQ8WY64 445 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 SYMPKQ92797 1274 aaKnown RBP19.74■□□□□ 0.75
DDX55-202ENST00000354291 OSBPL5Q9H0X9 879 aaPredicted RBP19.74■□□□□ 0.75
DDX55-202ENST00000354291 GAKO14976 1311 aa19.74■□□□□ 0.75
DDX55-202ENST00000354291 USP17L5A8MUK1 530 aa19.73■□□□□ 0.75
DDX55-202ENST00000354291 SLF2Q8IX21 1173 aa19.73■□□□□ 0.75
DDX55-202ENST00000354291 ZGPATQ8N5A5 531 aaKnown RBP19.73■□□□□ 0.75
DDX55-202ENST00000354291 SIL1Q9H173 461 aa19.73■□□□□ 0.75
DDX55-202ENST00000354291 SHHQ15465 462 aa19.72■□□□□ 0.75
DDX55-202ENST00000354291 ATG9AQ7Z3C6 839 aa19.72■□□□□ 0.75
DDX55-202ENST00000354291 TXNRD2Q9NNW7 524 aa19.72■□□□□ 0.75
DDX55-202ENST00000354291 CEP126Q9P2H0 1117 aa19.72■□□□□ 0.75
DDX55-202ENST00000354291 PHIPQ8WWQ0 1821 aa19.72■□□□□ 0.75
DDX55-202ENST00000354291 DOCK2Q92608 1830 aa19.72■□□□□ 0.75
DDX55-202ENST00000354291 SEMA3EO15041 775 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 MAPK4P31152 587 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 CAP2P40123 477 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 RGS2P41220 211 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
DDX55-202ENST00000354291 RRP1BQ14684 758 aaKnown RBP19.71■□□□□ 0.75
DDX55-202ENST00000354291 SH3D19Q5HYK7 790 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 FAM9BQ8IZU0 186 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 FAM163AQ96GL9 167 aaPredicted RBP19.71■□□□□ 0.75
DDX55-202ENST00000354291 TBC1D2Q9BYX2 928 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 AS3MTQ9HBK9 375 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 TMOD4Q9NZQ9 345 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 DOCK1Q14185 1865 aa19.71■□□□□ 0.75
DDX55-202ENST00000354291 RFX7Q2KHR2 1363 aa19.7■□□□□ 0.74
DDX55-202ENST00000354291 HERVK_113P62684 666 aa19.7■□□□□ 0.74
DDX55-202ENST00000354291 Q3C1V9 767 aa19.7■□□□□ 0.74
DDX55-202ENST00000354291 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
DDX55-202ENST00000354291 CWC22Q9HCG8 908 aaKnown RBP19.7■□□□□ 0.74
DDX55-202ENST00000354291 COL2A1P02458 1487 aaPredicted RBP19.69■□□□□ 0.74
DDX55-202ENST00000354291 FOSL2P15408 326 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 MTMR2Q13614 643 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 C9orf50Q5SZB4 431 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 PLEKHH3Q7Z736 793 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 USP6NLQ92738 828 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 PAGR1Q9BTK6 254 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 PORCNQ9H237 461 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 RBPJLQ9UBG7 517 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 CDH23Q9H251 3354 aa19.69■□□□□ 0.74
DDX55-202ENST00000354291 MYH13Q9UKX3 1938 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 MUC3AQ02505 3323 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 PLXNB2O15031 1838 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 CNGA1P29973 690 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 ADORA1P30542 326 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 RHBDL3P58872 404 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 RTP1P59025 263 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 SPTY2D1Q68D10 685 aaPredicted RBP19.68■□□□□ 0.74
DDX55-202ENST00000354291 GPR142Q7Z601 462 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 TTYH1Q9H313 450 aaPredicted RBP19.68■□□□□ 0.74
DDX55-202ENST00000354291 RAPGEFL1Q9UHV5 662 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 ATP11BQ9Y2G3 1177 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 MROH7-TTC4A0A0A0MT08 1334 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 MYH2Q9UKX2 1941 aa19.68■□□□□ 0.74
DDX55-202ENST00000354291 GPR75-ASB3A0A0A6YYF3 556 aa19.67■□□□□ 0.74
DDX55-202ENST00000354291 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
DDX55-202ENST00000354291 BACE1P56817 501 aa19.67■□□□□ 0.74
DDX55-202ENST00000354291 ERVK-9P63128 1117 aa19.67■□□□□ 0.74
DDX55-202ENST00000354291 ERVK-24P63145 666 aa19.67■□□□□ 0.74
DDX55-202ENST00000354291 MORN1Q5T089 497 aa19.67■□□□□ 0.74
DDX55-202ENST00000354291 CCDC102BQ68D86 513 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms