RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 DHX36Q9H2U1 1008 aaKnown RBP23.79■■□□□ 1.4
SIGMAR1-202ENST00000353468 TOMM22Q9NS69 142 aa23.79■■□□□ 1.4
SIGMAR1-202ENST00000353468 ROBO3Q96MS0 1386 aa23.79■■□□□ 1.4
SIGMAR1-202ENST00000353468 EXOSC10Q01780 885 aaKnown RBP23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 ZSCAN29Q8IWY8 852 aaPredicted RBP23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 DDTLA6NHG4 134 aaPredicted RBP23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 CD2BP2O95400 341 aaKnown RBP23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 HLA-DOAP06340 250 aa23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 RRP12Q5JTH9 1297 aaKnown RBP23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 FAM83AQ86UY5 434 aa23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 FAM151AQ8WW52 585 aa23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 TCEANC2Q96MN5 208 aa23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 ADARB2Q9NS39 739 aaKnown RBP23.78■■□□□ 1.4
SIGMAR1-202ENST00000353468 ORC4O43929 436 aa23.77■■□□□ 1.4
SIGMAR1-202ENST00000353468 MCM5P33992 734 aa23.77■■□□□ 1.4
SIGMAR1-202ENST00000353468 C16orf86Q6ZW13 317 aa23.77■■□□□ 1.4
SIGMAR1-202ENST00000353468 SH3BP5LQ7L8J4 393 aa23.77■■□□□ 1.4
SIGMAR1-202ENST00000353468 NKX2-3Q8TAU0 364 aa23.77■■□□□ 1.4
SIGMAR1-202ENST00000353468 PRDM1O75626 825 aa23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 HIRAP54198 1017 aaPredicted RBP23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 CHST3Q7LGC8 479 aa23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 TBC1D2Q9BYX2 928 aa23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 ALDH8A1Q9H2A2 487 aaPredicted RBP23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 ZSWIM5Q9P217 1185 aa23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 HACL1Q9UJ83 578 aa23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 ASTN2O75129 1339 aaPredicted RBP23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 CNTNAP1P78357 1384 aa23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 ATRNL1Q5VV63 1379 aa23.76■■□□□ 1.39
SIGMAR1-202ENST00000353468 KDM4AO75164 1064 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 TNNI2P48788 182 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 CDK8P49336 464 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 AK2P54819 239 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 GABPAQ06546 454 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 TNFAIP1Q13829 316 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 BECN1Q14457 450 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 CYB5R4Q7L1T6 521 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 HSCBQ8IWL3 235 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 ESR2Q92731 530 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 MKNK2Q9HBH9 465 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 ZNF287Q9HBT7 754 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 PI4KBQ9UBF8 816 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 SERPINB13Q9UIV8 391 aa23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 COL2A1P02458 1487 aaPredicted RBP23.75■■□□□ 1.39
SIGMAR1-202ENST00000353468 PRC1O43663 620 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 MCM2P49736 904 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 ANTXR2P58335 489 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 Q6ZUG5 572 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 SLC44A5Q8NCS7 719 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 EHD4Q9H223 541 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 WDR19Q8NEZ3 1342 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 RANBP6O60518 1105 aaKnown RBP23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 FOXP4Q8IVH2 680 aaPredicted RBP23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 LRRC2Q9BYS8 371 aa23.74■■□□□ 1.39
SIGMAR1-202ENST00000353468 NT5C2P49902 561 aa23.73■■□□□ 1.39
SIGMAR1-202ENST00000353468 SWAP70Q9UH65 585 aa23.73■■□□□ 1.39
SIGMAR1-202ENST00000353468 FGD1P98174 961 aa23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 RASA3Q14644 834 aa23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 ANKRD1Q15327 319 aa23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 ANGEL2Q5VTE6 544 aaKnown RBP23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 ZNF444Q8N0Y2 327 aaPredicted RBP23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 IPO9Q96P70 1041 aaKnown RBP23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 CSRNP1Q96S65 589 aa23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 TMEM39BQ9GZU3 492 aa23.72■■□□□ 1.39
SIGMAR1-202ENST00000353468 EPHX2P34913 555 aa23.71■■□□□ 1.39
SIGMAR1-202ENST00000353468 TOB2Q14106 344 aaPredicted RBP23.71■■□□□ 1.39
SIGMAR1-202ENST00000353468 NOL8Q76FK4 1167 aaKnown RBP23.71■■□□□ 1.39
SIGMAR1-202ENST00000353468 APOBEC3FQ8IUX4 373 aaKnown RBP23.71■■□□□ 1.39
SIGMAR1-202ENST00000353468 CRACR2BQ8N4Y2 399 aaPredicted RBP23.71■■□□□ 1.39
SIGMAR1-202ENST00000353468 TAOK2Q9UL54 1235 aa23.71■■□□□ 1.39
SIGMAR1-202ENST00000353468 SCAF8Q9UPN6 1271 aaKnown RBP23.71■■□□□ 1.39
SIGMAR1-202ENST00000353468 IQCA1LA6NCM1 817 aa23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 K7ELQ4 463 aaPredicted RBP23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 RASA1P20936 1047 aa23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 USP50Q70EL3 339 aaPredicted RBP23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 METTL16Q86W50 562 aaKnown RBP23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 FBXL16Q8N461 479 aa23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 TMEM87BQ96K49 555 aa23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 LARP6Q9BRS8 491 aaKnown RBP23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 AGXT2Q9BYV1 514 aa23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 GGA3Q9NZ52 723 aa23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 PGAP2Q9UHJ9 254 aa23.7■■□□□ 1.38
SIGMAR1-202ENST00000353468 TSPY2A6NKD2 308 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 FAM47AQ5JRC9 791 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 MTA3Q9BTC8 594 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 POTECB2RU33 542 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 TFAP4Q01664 338 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 IGDCC4Q8TDY8 1250 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 BRF1Q92994 677 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 ZKSCAN3Q9BRR0 538 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 TRIM34Q9BYJ4 488 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 DEFB129Q9H1M3 183 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 DNAJC18Q9H819 358 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 LIMCH1Q9UPQ0 1083 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 SIPA1L1O43166 1804 aa23.69■■□□□ 1.38
SIGMAR1-202ENST00000353468 SCN4AP35499 1836 aa23.68■■□□□ 1.38
SIGMAR1-202ENST00000353468 IFIT3O14879 490 aaKnown RBP23.68■■□□□ 1.38
SIGMAR1-202ENST00000353468 SLURP2P0DP57 97 aa23.68■■□□□ 1.38
SIGMAR1-202ENST00000353468 SHMT1P34896 483 aa23.68■■□□□ 1.38
SIGMAR1-202ENST00000353468 SART3Q15020 963 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms