RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 MS4A4AQ96JQ5 239 aa19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 ZFYVE28Q9HCC9 887 aa19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 ZCCHC17Q9NP64 241 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 PHF20L1A8MW92 1017 aa19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 CXCL11O14625 94 aa19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 AMOTL1Q8IY63 956 aa19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 BRI3BPQ8WY22 251 aa19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 EDC3Q96F86 508 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 TBC1D2Q9BYX2 928 aa19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 SAP30BPQ9UHR5 308 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 PALD1Q9ULE6 856 aa19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 ZHX2Q9Y6X8 837 aa19.04■□□□□ 0.64
TSPAN4-201ENST00000346501 MYO5AQ9Y4I1 1855 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 CASP8AP2Q9UKL3 1982 aa19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 GLRX3O76003 335 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 PTPRAP18433 802 aa19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 ADD2P35612 726 aa19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 ARHGEF6Q15052 776 aa19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 FASTKD5Q7L8L6 764 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 ZNF296Q8WUU4 475 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 KCNH4Q9UQ05 1017 aa19.03■□□□□ 0.64
TSPAN4-201ENST00000346501 POLR3DP05423 398 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-201ENST00000346501 UBE3CQ15386 1083 aa19.02■□□□□ 0.64
TSPAN4-201ENST00000346501 CTU1Q7Z7A3 348 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-201ENST00000346501 AS3MTQ9HBK9 375 aa19.02■□□□□ 0.64
TSPAN4-201ENST00000346501 GINM1Q9NU53 330 aa19.02■□□□□ 0.64
TSPAN4-201ENST00000346501 FAM196BA6NMK8 535 aa19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 ZFYP08048 801 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 MX1P20591 662 aa19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 CAP2P40123 477 aa19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 CRHR2Q13324 411 aa19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 PKN2Q16513 984 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 ERO1AQ96HE7 468 aa19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 PTPN18Q99952 460 aa19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 RIOK1Q9BRS2 568 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-201ENST00000346501 ASNSP08243 561 aa19■□□□□ 0.63
TSPAN4-201ENST00000346501 ANKRD23Q86SG2 305 aa19■□□□□ 0.63
TSPAN4-201ENST00000346501 KBTBD3Q8NAB2 608 aa19■□□□□ 0.63
TSPAN4-201ENST00000346501 EXOC6Q8TAG9 804 aa19■□□□□ 0.63
TSPAN4-201ENST00000346501 MCOLN1Q9GZU1 580 aa19■□□□□ 0.63
TSPAN4-201ENST00000346501 MCM9Q9NXL9 1143 aa19■□□□□ 0.63
TSPAN4-201ENST00000346501 SERPINB13Q9UIV8 391 aa19■□□□□ 0.63
TSPAN4-201ENST00000346501 TCRBV5S4A2TA0A5A2 114 aa18.99■□□□□ 0.63
TSPAN4-201ENST00000346501 USP17L5A8MUK1 530 aa18.99■□□□□ 0.63
TSPAN4-201ENST00000346501 BTBD19C9JJ37 291 aa18.99■□□□□ 0.63
TSPAN4-201ENST00000346501 CAPN15O75808 1086 aa18.99■□□□□ 0.63
TSPAN4-201ENST00000346501 ATP8A2Q9NTI2 1148 aa18.99■□□□□ 0.63
TSPAN4-201ENST00000346501 LAMB1P07942 1786 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 TRIM75PA6NK02 468 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 MBD4O95243 580 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 SP3Q02447 781 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 KIF22Q14807 665 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 SLC4A8Q2Y0W8 1093 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 GADL1Q6ZQY3 521 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 ABHD8Q96I13 439 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 EHD4Q9H223 541 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 ARMT1Q9H993 441 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 AFG3L2Q9Y4W6 797 aa18.98■□□□□ 0.63
TSPAN4-201ENST00000346501 PDHXO00330 501 aa18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 TSHZ3Q63HK5 1081 aa18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 METTL16Q86W50 562 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 ZNF280CQ8ND82 737 aa18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 PARK7Q99497 189 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 FSD1Q9BTV5 496 aa18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 TAOK2Q9UL54 1235 aa18.97■□□□□ 0.63
TSPAN4-201ENST00000346501 FOCADQ5VW36 1801 aa18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 A0A0G2JLL6 359 aaPredicted RBP18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 RNF113AO15541 343 aaKnown RBP18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 TLR2O60603 784 aa18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 SLURP2P0DP57 97 aa18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 PABPC4Q13310 644 aaKnown RBP eCLIP18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 PRRT2Q7Z6L0 340 aaPredicted RBP18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 SDR42E1Q8WUS8 393 aa18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 R3HDMLQ9H3Y0 253 aa18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 SLC4A4Q9Y6R1 1079 aa18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 DOCK1Q14185 1865 aa18.96■□□□□ 0.63
TSPAN4-201ENST00000346501 SPP2Q13103 211 aa18.95■□□□□ 0.62
TSPAN4-201ENST00000346501 CERKLQ49MI3 558 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-201ENST00000346501 APPBP2Q92624 585 aa18.95■□□□□ 0.62
TSPAN4-201ENST00000346501 DCP1AQ9NPI6 582 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-201ENST00000346501 TMOD4Q9NZQ9 345 aa18.95■□□□□ 0.62
TSPAN4-201ENST00000346501 PNMA3Q9UL41 463 aa18.95■□□□□ 0.62
TSPAN4-201ENST00000346501 MYH1P12882 1939 aa18.95■□□□□ 0.62
TSPAN4-201ENST00000346501 GNAT2P19087 354 aa18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 PROCA1Q8NCQ7 364 aaPredicted RBP18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 LNPKQ9C0E8 428 aa18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 SWAP70Q9UH65 585 aa18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 SLC45A1Q9Y2W3 748 aa18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 CDK5RAP2Q96SN8 1893 aa18.94■□□□□ 0.62
TSPAN4-201ENST00000346501 CCDC85CA6NKD9 419 aa18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 C19orf81C9J6K1 198 aa18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 GDF11O95390 407 aa18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 PI4K2BQ8TCG2 481 aa18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 SMCR8Q8TEV9 937 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 WDR18Q9BV38 432 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms