RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RMND1Q9NWS8 449 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 CEP83Q9Y592 693 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 SSH2Q76I76 1423 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 IGSF1Q8N6C5 1336 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 SP4Q02446 784 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 KRT79Q5XKE5 535 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 IFT74Q96LB3 600 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.45
CLCN6-202ENST00000346436 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 NLRX1Q86UT6 975 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 TBC1D5Q92609 795 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 DHX58Q96C10 678 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 TSNARE1Q96NA8 513 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 AP5M1Q9H0R1 490 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 SNX16P57768 344 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 ENOX2Q16206 610 aaKnown RBP12.26□□□□□ -0.45
CLCN6-202ENST00000346436 HS2ST1Q7LGA3 356 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 PHKBQ93100 1093 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 SIK1P57059 783 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 DPP9Q86TI2 863 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 FAM193BQ96PV7 902 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-202ENST00000346436 HAUS2Q9NVX0 235 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 RBM28Q9NW13 759 aaKnown RBP12.26□□□□□ -0.45
CLCN6-202ENST00000346436 SLU7O95391 586 aaKnown RBP12.26□□□□□ -0.45
CLCN6-202ENST00000346436 KBTBD3Q8NAB2 608 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 PI4K2BQ8TCG2 481 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 GTF3C6Q969F1 213 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 NACA2Q9H009 215 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 EXOC1Q9NV70 894 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 TTF2Q9UNY4 1162 aaKnown RBP12.26□□□□□ -0.45
CLCN6-202ENST00000346436 USP6P35125 1406 aa12.26□□□□□ -0.45
CLCN6-202ENST00000346436 PALM3A6NDB9 673 aaPredicted RBP12.25□□□□□ -0.45
CLCN6-202ENST00000346436 EYA2O00167 538 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 PPEF1O14829 653 aaPredicted RBP12.25□□□□□ -0.45
CLCN6-202ENST00000346436 KCTD2Q14681 263 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 NSMFQ6X4W1 530 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 HELLSQ9NRZ9 838 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 IQSEC2Q5JU85 1478 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
CLCN6-202ENST00000346436 SMTNP53814 917 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 USP28Q96RU2 1077 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 TAOK3Q9H2K8 898 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 E7EWF7 191 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 CCDC91Q7Z6B0 441 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 KRT222Q8N1A0 295 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 PLVAPQ9BX97 442 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 CENPHQ9H3R5 247 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 ADGRB3O60242 1522 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
CLCN6-202ENST00000346436 KDRP35968 1356 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 GTF2IP78347 998 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 SMC1AQ14683 1233 aaKnown RBP12.24□□□□□ -0.45
CLCN6-202ENST00000346436 JAG2Q9Y219 1238 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 USP14P54578 494 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 LZTFL1Q9NQ48 299 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 SLC1A4P43007 532 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 ZYXQ15942 572 aaKnown RBP12.24□□□□□ -0.45
CLCN6-202ENST00000346436 CIAPIN1Q6FI81 312 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 MACROD2A1Z1Q3 448 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 EIF3JO75822 258 aaKnown RBP12.24□□□□□ -0.45
CLCN6-202ENST00000346436 SERPINB2P05120 415 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 LMAN1P49257 510 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 LPIN2Q92539 896 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 MRVI1Q9Y6F6 885 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 BBOX1O75936 387 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 ZAP70P43403 619 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 MTIF3Q9H2K0 278 aaKnown RBP12.24□□□□□ -0.45
CLCN6-202ENST00000346436 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-202ENST00000346436 USP40Q9NVE5 1235 aa12.24□□□□□ -0.45
CLCN6-202ENST00000346436 SAP30BPQ9UHR5 308 aaKnown RBP12.24□□□□□ -0.45
CLCN6-202ENST00000346436 DBNLQ9UJU6 430 aaKnown RBP12.24□□□□□ -0.45
CLCN6-202ENST00000346436 IQGAP1P46940 1657 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 PPRC1Q5VV67 1664 aaKnown RBP12.23□□□□□ -0.45
CLCN6-202ENST00000346436 N4BP3O15049 544 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 ELF2Q15723 593 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 PTPN21Q16825 1174 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 MAP4K1Q92918 833 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 GPAA1O43292 621 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 ATP5JP18859 108 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 SCRN1Q12765 414 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 MFSD14BQ5SR56 506 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 RRAGBQ5VZM2 374 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-202ENST00000346436 STRN3Q13033 797 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 ANO1Q5XXA6 986 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 CPXCR1Q8N123 301 aa12.23□□□□□ -0.45
CLCN6-202ENST00000346436 ALS2CR12Q96Q35 445 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms