RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 ZKSCAN3Q9BRR0 538 aa29.46■■■□□ 2.31
TRADD-201ENST00000345057 SENP2Q9HC62 589 aa29.46■■■□□ 2.31
TRADD-201ENST00000345057 GDPD2Q9HCC8 539 aa29.46■■■□□ 2.31
TRADD-201ENST00000345057 ELP1O95163 1332 aa29.45■■■□□ 2.31
TRADD-201ENST00000345057 SEC23AQ15436 765 aa29.45■■■□□ 2.31
TRADD-201ENST00000345057 CAVIN1Q6NZI2 390 aaKnown RBP29.45■■■□□ 2.31
TRADD-201ENST00000345057 TEX11Q8IYF3 940 aa29.45■■■□□ 2.31
TRADD-201ENST00000345057 TGFBRAP1Q8WUH2 860 aa29.45■■■□□ 2.31
TRADD-201ENST00000345057 FBXW7Q969H0 707 aa29.45■■■□□ 2.31
TRADD-201ENST00000345057 C8orf76Q96K31 380 aa29.45■■■□□ 2.31
TRADD-201ENST00000345057 NAV1Q8NEY1 1877 aa29.45■■■□□ 2.31
TRADD-201ENST00000345057 TCHHQ07283 1943 aa29.45■■■□□ 2.3
TRADD-201ENST00000345057 STK36Q9NRP7 1315 aa29.45■■■□□ 2.3
TRADD-201ENST00000345057 SLX4Q8IY92 1834 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 GOLGA6L3A6NEY3 463 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 FKBP1AP62942 108 aaKnown RBP29.44■■■□□ 2.3
TRADD-201ENST00000345057 CFAP45Q9UL16 551 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 ADD1P35611 737 aaKnown RBP29.44■■■□□ 2.3
TRADD-201ENST00000345057 IARSP41252 1262 aaKnown RBP29.44■■■□□ 2.3
TRADD-201ENST00000345057 DOK7Q18PE1 504 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 CCDC178Q5BJE1 867 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 RAB11FIP4Q86YS3 637 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 ZNF654Q8IZM8 581 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 WASF1Q92558 559 aa29.44■■■□□ 2.3
TRADD-201ENST00000345057 USP17L8P0C7I0 530 aa29.43■■■□□ 2.3
TRADD-201ENST00000345057 CALM1P0DP23 149 aa29.43■■■□□ 2.3
TRADD-201ENST00000345057 CALM2P0DP24 149 aa29.43■■■□□ 2.3
TRADD-201ENST00000345057 CALM3P0DP25 149 aa29.43■■■□□ 2.3
TRADD-201ENST00000345057 RTN1Q16799 776 aa29.43■■■□□ 2.3
TRADD-201ENST00000345057 IFIT1BQ5T764 474 aaKnown RBP29.43■■■□□ 2.3
TRADD-201ENST00000345057 CDC27P30260 824 aa29.42■■■□□ 2.3
TRADD-201ENST00000345057 C7orf43Q8WVR3 580 aa29.42■■■□□ 2.3
TRADD-201ENST00000345057 POLR3DP05423 398 aaPredicted RBP29.42■■■□□ 2.3
TRADD-201ENST00000345057 IFNAR1P17181 557 aa29.42■■■□□ 2.3
TRADD-201ENST00000345057 CATIPQ7Z7H3 387 aa29.42■■■□□ 2.3
TRADD-201ENST00000345057 ENAHQ8N8S7 591 aaPredicted RBP29.42■■■□□ 2.3
TRADD-201ENST00000345057 FBXO18Q8NFZ0 1043 aa29.42■■■□□ 2.3
TRADD-201ENST00000345057 PRDM1O75626 825 aa29.41■■■□□ 2.3
TRADD-201ENST00000345057 NTRK3Q16288 839 aa29.41■■■□□ 2.3
TRADD-201ENST00000345057 DLEC1Q9Y238 1755 aa29.41■■■□□ 2.3
TRADD-201ENST00000345057 CYP2D6P10635 497 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 RXRAP19793 462 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 RHBDL3P58872 404 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 SSRP1Q08945 709 aaKnown RBP29.4■■■□□ 2.3
TRADD-201ENST00000345057 STRIP1Q5VSL9 837 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 TRIM22Q8IYM9 498 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 TTF2Q9UNY4 1162 aaKnown RBP29.4■■■□□ 2.3
TRADD-201ENST00000345057 DAGLAQ9Y4D2 1042 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 TSPY2A6NKD2 308 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 HHIPL2Q6UWX4 724 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 ZNF396Q96N95 335 aaPredicted RBP29.4■■■□□ 2.3
TRADD-201ENST00000345057 MYL10Q9BUA6 226 aa29.4■■■□□ 2.3
TRADD-201ENST00000345057 FAM217BQ9NTX9 383 aaPredicted RBP29.4■■■□□ 2.3
TRADD-201ENST00000345057 FSD2A1L4K1 749 aa29.39■■■□□ 2.3
TRADD-201ENST00000345057 DDAH1O94760 285 aa29.39■■■□□ 2.3
TRADD-201ENST00000345057 MAPKAPK5Q8IW41 473 aa29.39■■■□□ 2.3
TRADD-201ENST00000345057 CCDC144CPQ8IYA2 1237 aa29.39■■■□□ 2.3
TRADD-201ENST00000345057 FANCBQ8NB91 859 aa29.39■■■□□ 2.3
TRADD-201ENST00000345057 MKNK2Q9HBH9 465 aa29.39■■■□□ 2.3
TRADD-201ENST00000345057 RBM28Q9NW13 759 aaKnown RBP29.39■■■□□ 2.3
TRADD-201ENST00000345057 SMIM22K7EJ46 135 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 FMNL1O95466 1100 aaPredicted RBP29.38■■■□□ 2.29
TRADD-201ENST00000345057 ZNF445P59923 1031 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 CERS5Q8N5B7 392 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 TTLL6Q8N841 843 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 SPATA32Q96LK8 384 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 ALG1Q9BT22 464 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 FLT1P17948 1338 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 GADD45BO75293 160 aaPredicted RBP29.38■■■□□ 2.29
TRADD-201ENST00000345057 TRIM29Q14134 588 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 ZSCAN23Q3MJ62 389 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 BRAPQ7Z569 592 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 MRIQ9BWK5 157 aa29.38■■■□□ 2.29
TRADD-201ENST00000345057 KIAA2012Q0VF49 1180 aa29.37■■■□□ 2.29
TRADD-201ENST00000345057 NUP133Q8WUM0 1156 aa29.37■■■□□ 2.29
TRADD-201ENST00000345057 TEKT1Q969V4 418 aa29.37■■■□□ 2.29
TRADD-201ENST00000345057 PDGFDQ9GZP0 370 aaPredicted RBP29.37■■■□□ 2.29
TRADD-201ENST00000345057 DBNDD1Q9H9R9 158 aa29.37■■■□□ 2.29
TRADD-201ENST00000345057 ECE2O60344 883 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 RTKN2Q8IZC4 609 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 SNED1Q8TER0 1413 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 CDK5RAP2Q96SN8 1893 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 DDX60LQ5H9U9 1706 aaKnown RBP29.36■■■□□ 2.29
TRADD-201ENST00000345057 PPFIA3O75145 1194 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 FOSBP53539 338 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 CCDC93Q567U6 631 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 FAM173BQ6P4H8 233 aa29.36■■■□□ 2.29
TRADD-201ENST00000345057 ZNF444Q8N0Y2 327 aaPredicted RBP29.36■■■□□ 2.29
TRADD-201ENST00000345057 HDLBPQ00341 1268 aaKnown RBP29.35■■■□□ 2.29
TRADD-201ENST00000345057 KLHL34Q8N239 644 aa29.35■■■□□ 2.29
TRADD-201ENST00000345057 ZNF219Q9P2Y4 722 aaPredicted RBP29.35■■■□□ 2.29
TRADD-201ENST00000345057 GUCY1B3Q02153 619 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 TTC6Q86TZ1 520 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 DGKHQ86XP1 1220 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 LEO1Q8WVC0 666 aaPredicted RBP29.34■■■□□ 2.29
TRADD-201ENST00000345057 PHKBQ93100 1093 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 SLC26A6Q9BXS9 759 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 TCP11L1Q9NUJ3 509 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 FOCADQ5VW36 1801 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 USP17L3A6NCW0 530 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms