RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 DCAF15Q66K64 600 aa16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 APOBEC3HQ6NTF7 200 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 UBE2Q1Q7Z7E8 422 aa16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 ANKRD23Q86SG2 305 aa16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 ANO2Q9NQ90 1003 aa16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 TMOD2Q9NZR1 351 aa16.17■□□□□ 0.18
HERPUD1-202ENST00000344114 PSMC4P43686 418 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 VPS37DQ86XT2 251 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 NKX2-3Q8TAU0 364 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 TRIM47Q96LD4 638 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 HAUS7Q99871 368 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 FSD1Q9BTV5 496 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 PRO3102Q9H379 93 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 RBM27Q9P2N5 1060 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 CPA4Q9UI42 421 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 KCNH4Q9UQ05 1017 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 SUGT1Q9Y2Z0 365 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 MAST3O60307 1309 aa16.16■□□□□ 0.18
HERPUD1-202ENST00000344114 OSBPP22059 807 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 HOXD10P28358 340 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 GRK4P32298 578 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 GJA8P48165 433 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 ANAPC15P60006 121 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 CAVIN4Q5BKX8 364 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 HHIPL2Q6UWX4 724 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 ZNF341Q9BYN7 854 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 ZNF112Q9UJU3 913 aa16.15■□□□□ 0.18
HERPUD1-202ENST00000344114 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 PDE8BO95263 885 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 GJB1P08034 283 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 INPP5BP32019 993 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 SLC4A3P48751 1232 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 MOGSQ13724 837 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 ATP2B3Q16720 1220 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 IL27Q8NEV9 243 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 DPF3Q92784 378 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 IL17RAQ96F46 866 aa16.14■□□□□ 0.17
HERPUD1-202ENST00000344114 PDHXO00330 501 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 BCAMP50895 628 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 TIMM10P62072 90 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 CCDC158Q5M9N0 1113 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 CWC27Q6UX04 472 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 KIAA1211Q6ZU35 1233 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 RAET1EQ8TD07 263 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 HTATIP2Q9BUP3 242 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 SNRKQ9NRH2 765 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 MYPNQ86TC9 1320 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 ECM2O94769 699 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 CCL5P13501 91 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 NOL9Q5SY16 702 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 MIGA2Q7L4E1 593 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 FAM151AQ8WW52 585 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 LSG1Q9H089 658 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 IL25Q9H293 177 aa16.13■□□□□ 0.17
HERPUD1-202ENST00000344114 PTPRFP10586 1907 aa16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 FMNL1O95466 1100 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 IFIT1P09914 478 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 BCRP11274 1271 aa16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 FGFR2P21802 821 aa16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 GORABQ5T7V8 394 aa16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 DNAJC2Q99543 621 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-202ENST00000344114 HSPA4P34932 840 aa16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 UBXN2AP68543 259 aa16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 NMIQ13287 307 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 PUM3Q15397 648 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 KBTBD3Q8NAB2 608 aa16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 RNF208Q9H0X6 261 aa16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 PAG1Q9NWQ8 432 aa16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 MAST2Q6P0Q8 1798 aa16.11■□□□□ 0.17
HERPUD1-202ENST00000344114 RANBP2P49792 3224 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 ST18O60284 1047 aa16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 PRKCZQ05513 592 aa16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 SLAIN1Q8ND83 568 aa16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 PARK7Q99497 189 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 ALPK3Q96L96 1907 aa16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 CCDC171Q6TFL3 1326 aa16.1■□□□□ 0.17
HERPUD1-202ENST00000344114 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 SLC5A1P13866 664 aa16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 ADORA1P30542 326 aa16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 FCGRTP55899 365 aa16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 LPIN2Q92539 896 aa16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 DAGLAQ9Y4D2 1042 aa16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 NR2E3Q9Y5X4 410 aa16.09■□□□□ 0.17
HERPUD1-202ENST00000344114 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 A0A1W2PPC1 479 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 CXCL11O14625 94 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 FARP2O94887 1054 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms