RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PICK1Q9NRD5 415 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 CPA4Q9UI42 421 aa21.9■■□□□ 1.1
USF2-202ENST00000343550 MYO5AQ9Y4I1 1855 aaKnown RBP21.89■■□□□ 1.1
USF2-202ENST00000343550 IDH1O75874 414 aaKnown RBP21.89■■□□□ 1.09
USF2-202ENST00000343550 GNRH1P01148 92 aa21.89■■□□□ 1.09
USF2-202ENST00000343550 IGHDP01880 384 aa21.89■■□□□ 1.09
USF2-202ENST00000343550 TMEM106CQ9BVX2 250 aa21.89■■□□□ 1.09
USF2-202ENST00000343550 ZHX2Q9Y6X8 837 aa21.89■■□□□ 1.09
USF2-202ENST00000343550 EN2P19622 333 aaPredicted RBP21.88■■□□□ 1.09
USF2-202ENST00000343550 RHBDL3P58872 404 aa21.88■■□□□ 1.09
USF2-202ENST00000343550 TTF1Q15361 905 aaPredicted RBP21.88■■□□□ 1.09
USF2-202ENST00000343550 ANKRD45Q5TZF3 282 aa21.88■■□□□ 1.09
USF2-202ENST00000343550 HAUS7Q99871 368 aa21.88■■□□□ 1.09
USF2-202ENST00000343550 ECHDC1Q9NTX5 307 aa21.88■■□□□ 1.09
USF2-202ENST00000343550 GOLIM4O00461 696 aa21.87■■□□□ 1.09
USF2-202ENST00000343550 PTPRAP18433 802 aa21.87■■□□□ 1.09
USF2-202ENST00000343550 MAP3K12Q12852 859 aa21.87■■□□□ 1.09
USF2-202ENST00000343550 ADGRA1Q86SQ6 560 aa21.87■■□□□ 1.09
USF2-202ENST00000343550 DNAJC2Q99543 621 aaKnown RBP21.87■■□□□ 1.09
USF2-202ENST00000343550 CTNND1O60716 968 aaKnown RBP21.86■■□□□ 1.09
USF2-202ENST00000343550 SLURP2P0DP57 97 aa21.86■■□□□ 1.09
USF2-202ENST00000343550 PRMT2P55345 433 aa21.86■■□□□ 1.09
USF2-202ENST00000343550 GPAT2Q6NUI2 795 aa21.86■■□□□ 1.09
USF2-202ENST00000343550 EDC3Q96F86 508 aaKnown RBP21.86■■□□□ 1.09
USF2-202ENST00000343550 ADGRA2Q96PE1 1338 aa21.86■■□□□ 1.09
USF2-202ENST00000343550 NPM3O75607 178 aaKnown RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 ECM2O94769 699 aaPredicted RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 MAP4K4O95819 1239 aaPredicted RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 CYP7A1P22680 504 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 PPP4CP60510 307 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 SMC5Q8IY18 1101 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 PAG1Q9NWQ8 432 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 AFG3L2Q9Y4W6 797 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 A0A0G2JLL6 359 aaPredicted RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 BAG3O95817 575 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 CTGFP29279 349 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 PSMC4P43686 418 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 TMED8Q6PL24 325 aaPredicted RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 FASTKD5Q7L8L6 764 aaKnown RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 PRRT2Q7Z6L0 340 aaPredicted RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 MAGEB6Q8N7X4 407 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 SH3TC2Q8TF17 1288 aa21.85■■□□□ 1.09
USF2-202ENST00000343550 PARK7Q99497 189 aaKnown RBP21.85■■□□□ 1.09
USF2-202ENST00000343550 AATFQ9NY61 560 aaKnown RBP eCLIP21.85■■□□□ 1.09
USF2-202ENST00000343550 KIAA0100Q14667 2235 aaKnown RBP21.84■■□□□ 1.09
USF2-202ENST00000343550 TBC1D12O60347 775 aa21.84■■□□□ 1.09
USF2-202ENST00000343550 SLC4A8Q2Y0W8 1093 aa21.84■■□□□ 1.09
USF2-202ENST00000343550 OTUD7AQ8TE49 926 aaPredicted RBP21.84■■□□□ 1.09
USF2-202ENST00000343550 GPATCH3Q96I76 525 aa21.84■■□□□ 1.09
USF2-202ENST00000343550 TRIM47Q96LD4 638 aa21.84■■□□□ 1.09
USF2-202ENST00000343550 NOL10Q9BSC4 688 aaKnown RBP21.84■■□□□ 1.09
USF2-202ENST00000343550 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
USF2-202ENST00000343550 DOCK2Q92608 1830 aa21.83■■□□□ 1.09
USF2-202ENST00000343550 MYCP01106 439 aaPredicted RBP21.83■■□□□ 1.09
USF2-202ENST00000343550 CYP2C8P10632 490 aa21.83■■□□□ 1.09
USF2-202ENST00000343550 TSHZ3Q63HK5 1081 aa21.83■■□□□ 1.09
USF2-202ENST00000343550 SH3RF3Q8TEJ3 882 aaPredicted RBP21.83■■□□□ 1.09
USF2-202ENST00000343550 FMNL1O95466 1100 aaPredicted RBP21.82■■□□□ 1.08
USF2-202ENST00000343550 HOXD10P28358 340 aa21.82■■□□□ 1.08
USF2-202ENST00000343550 SLC9C2Q5TAH2 1124 aa21.82■■□□□ 1.08
USF2-202ENST00000343550 SRRDQ9UH36 339 aa21.82■■□□□ 1.08
USF2-202ENST00000343550 TTC41PQ6P2S7 1318 aa21.82■■□□□ 1.08
USF2-202ENST00000343550 RBBP6Q7Z6E9 1792 aaKnown RBP21.82■■□□□ 1.08
USF2-202ENST00000343550 ZSWIM8A7E2V4 1837 aa21.82■■□□□ 1.08
USF2-202ENST00000343550 PLCG2P16885 1265 aa21.81■■□□□ 1.08
USF2-202ENST00000343550 OSBPP22059 807 aa21.81■■□□□ 1.08
USF2-202ENST00000343550 GADL1Q6ZQY3 521 aa21.81■■□□□ 1.08
USF2-202ENST00000343550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.81■■□□□ 1.08
USF2-202ENST00000343550 MAST2Q6P0Q8 1798 aa21.81■■□□□ 1.08
USF2-202ENST00000343550 TRIM75PA6NK02 468 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 BCRP11274 1271 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 DYNLL1P63167 89 aaKnown RBP21.8■■□□□ 1.08
USF2-202ENST00000343550 B4GALNT3Q6L9W6 998 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 TEX11Q8IYF3 940 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 OSBPL5Q9H0X9 879 aaPredicted RBP21.8■■□□□ 1.08
USF2-202ENST00000343550 SLC45A1Q9Y2W3 748 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 SALL3Q9BXA9 1300 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 FAM196BA6NMK8 535 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 PDE6AP16499 860 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 MIGA1Q8NAN2 632 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 PI4K2BQ8TCG2 481 aa21.8■■□□□ 1.08
USF2-202ENST00000343550 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.8■■□□□ 1.08
USF2-202ENST00000343550 TCRBV5S4A2TA0A5A2 114 aa21.79■■□□□ 1.08
USF2-202ENST00000343550 MX1P20591 662 aa21.79■■□□□ 1.08
USF2-202ENST00000343550 RAET1EQ8TD07 263 aa21.79■■□□□ 1.08
USF2-202ENST00000343550 COL2A1P02458 1487 aaPredicted RBP21.78■■□□□ 1.08
USF2-202ENST00000343550 ERC2O15083 957 aa21.78■■□□□ 1.08
USF2-202ENST00000343550 FCGRTP55899 365 aa21.78■■□□□ 1.08
USF2-202ENST00000343550 CCDC84Q86UT8 332 aaPredicted RBP21.78■■□□□ 1.08
USF2-202ENST00000343550 TGFBRAP1Q8WUH2 860 aa21.78■■□□□ 1.08
USF2-202ENST00000343550 LNPKQ9C0E8 428 aa21.78■■□□□ 1.08
USF2-202ENST00000343550 MYPNQ86TC9 1320 aa21.78■■□□□ 1.08
USF2-202ENST00000343550 ZNF532Q9HCE3 1301 aa21.78■■□□□ 1.08
USF2-202ENST00000343550 GLRX3O76003 335 aaKnown RBP21.77■■□□□ 1.08
USF2-202ENST00000343550 ADD2P35612 726 aa21.77■■□□□ 1.08
USF2-202ENST00000343550 NUCB1Q02818 461 aa21.77■■□□□ 1.08
USF2-202ENST00000343550 CHD1LQ86WJ1 897 aa21.77■■□□□ 1.08
USF2-202ENST00000343550 CERS3Q8IU89 383 aa21.77■■□□□ 1.08
USF2-202ENST00000343550 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.77■■□□□ 1.081e-6■□□□□ 8.9
USF2-202ENST00000343550 STAP2Q9UGK3 403 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms