RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 TPM1P09493 284 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 CDC27P30260 824 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 DHX8Q14562 1220 aaKnown RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 FUCA2Q9BTY2 467 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 CLSTN2Q9H4D0 955 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 PLEKHA4Q9H4M7 779 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 PCDHA7Q9UN72 937 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 EVX2Q03828 476 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 SMC1AQ14683 1233 aaKnown RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 MMS22LQ6ZRQ5 1243 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 COL18A1P39060 1754 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 ZFYP08048 801 aaPredicted RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 CYP7A1P22680 504 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 NDUFA8P51970 172 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 ZNF513Q8N8E2 541 aaPredicted RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 CLIC6Q96NY7 704 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 NBPF3Q9H094 633 aa13.9□□□□□ -0.18
TMEM220-201ENST00000341871 ZSCAN16Q9H4T2 348 aaPredicted RBP13.9□□□□□ -0.18
TMEM220-201ENST00000341871 IVLP07476 585 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 ACTN2P35609 894 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 CHRNDQ07001 517 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 ERFEQ4G0M1 354 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 SMARCC2Q8TAQ2 1214 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
TMEM220-201ENST00000341871 HPS5Q9UPZ3 1129 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 ARFGEF2Q9Y6D5 1785 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 USP27XA6NNY8 438 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 MB21D2Q8IYB1 491 aaPredicted RBP13.89□□□□□ -0.19
TMEM220-201ENST00000341871 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 PDILTQ8N807 584 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 LPIN2Q92539 896 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 ZNF396Q96N95 335 aaPredicted RBP13.89□□□□□ -0.19
TMEM220-201ENST00000341871 CLIP2Q9UDT6 1046 aa13.89□□□□□ -0.19
TMEM220-201ENST00000341871 SIPA1L3O60292 1781 aaPredicted RBP13.89□□□□□ -0.19
TMEM220-201ENST00000341871 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 KLRK1P26718 216 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 INTS5Q6P9B9 1019 aaKnown RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 CCAR2Q8N163 923 aaKnown RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 ZSWIM5Q9P217 1185 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 DYNLL1P63167 89 aaKnown RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 NAIF1Q69YI7 327 aaPredicted RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 IFNL3Q8IZI9 196 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 GPR101Q96P66 508 aaPredicted RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 EPB41L4AQ9HCS5 686 aaPredicted RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 ADAM21Q9UKJ8 722 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 ANGEL1Q9UNK9 670 aaKnown RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 SLC12A7Q9Y666 1083 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 ZBTB43O43298 467 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 RANBP6O60518 1105 aaKnown RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 CLSTN1O94985 981 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 GUCY1A2P33402 732 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
TMEM220-201ENST00000341871 RIC1Q4ADV7 1423 aa13.88□□□□□ -0.19
TMEM220-201ENST00000341871 MRC1P22897 1456 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 CCDC196A0A1B0GTZ2 297 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
TMEM220-201ENST00000341871 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 VPS18Q9P253 973 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 SMC2O95347 1197 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 FOXR1Q6PIV2 292 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 GBP6Q6ZN66 633 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 ADGRA1Q86SQ6 560 aa13.87□□□□□ -0.19
TMEM220-201ENST00000341871 ZNF274Q96GC6 653 aaPredicted RBP13.87□□□□□ -0.19
TMEM220-201ENST00000341871 STRBPQ96SI9 672 aaKnown RBP13.87□□□□□ -0.19
TMEM220-201ENST00000341871 IARSP41252 1262 aaKnown RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 TRIM29Q14134 588 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 MFSD6Q6ZSS7 791 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 CACTINQ8WUQ7 758 aaKnown RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 FAM53CQ9NYF3 392 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 SPTLC2O15270 562 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 APOA5Q6Q788 366 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 VGLL2Q8N8G2 317 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 SRRTQ9BXP5 876 aaKnown RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 KIF2AO00139 706 aaPredicted RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 SKILP12757 684 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 EIF5P55010 431 aaKnown RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 TTF1Q15361 905 aaPredicted RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 KRT40Q6A162 431 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 CELF1Q92879 486 aaKnown RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
TMEM220-201ENST00000341871 TACC3Q9Y6A5 838 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 ELP1O95163 1332 aa13.86□□□□□ -0.19
TMEM220-201ENST00000341871 PLEKHG2Q9H7P9 1386 aa13.85□□□□□ -0.19
TMEM220-201ENST00000341871 BCL9O00512 1426 aa13.85□□□□□ -0.19
TMEM220-201ENST00000341871 MYSM1Q5VVJ2 828 aa13.85□□□□□ -0.19
TMEM220-201ENST00000341871 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
TMEM220-201ENST00000341871 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
TMEM220-201ENST00000341871 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
TMEM220-201ENST00000341871 IRAK4Q9NWZ3 460 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms