RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
TPM3-207ENST00000341372 SUPT16HQ9Y5B9 1047 aaKnown RBP12.56□□□□□ -0.4
TPM3-207ENST00000341372 PCDHAC2Q9Y5I4 1007 aa12.56□□□□□ -0.4
TPM3-207ENST00000341372 MAST2Q6P0Q8 1798 aa12.56□□□□□ -0.4
TPM3-207ENST00000341372 SF3A1Q15459 793 aaKnown RBP12.55□□□□□ -0.4
TPM3-207ENST00000341372 APOBEC3FQ8IUX4 373 aaKnown RBP12.55□□□□□ -0.4
TPM3-207ENST00000341372 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
TPM3-207ENST00000341372 DBNDD2Q9BQY9 259 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 BIN2Q9UBW5 565 aaPredicted RBP12.55□□□□□ -0.4
TPM3-207ENST00000341372 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
TPM3-207ENST00000341372 THSD7BQ9C0I4 1608 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 PAPPA2Q9BXP8 1791 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 CRKP46108 304 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 KIF1BPQ96EK5 621 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 PRMT6Q96LA8 375 aaPredicted RBP12.55□□□□□ -0.4
TPM3-207ENST00000341372 CRBNQ96SW2 442 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 AOX1Q06278 1338 aa12.55□□□□□ -0.4
TPM3-207ENST00000341372 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 CELF2O95319 508 aaKnown RBP12.54□□□□□ -0.4
TPM3-207ENST00000341372 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 PRDX5P30044 214 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 ZNF662Q6ZS27 426 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
TPM3-207ENST00000341372 ZDHHC15Q96MV8 337 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 MCAMP43121 646 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 HHIPL2Q6UWX4 724 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 TEKT1Q969V4 418 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
TPM3-207ENST00000341372 TLR7Q9NYK1 1049 aaKnown RBP12.54□□□□□ -0.4
TPM3-207ENST00000341372 MYO1BO43795 1136 aa12.53□□□□□ -0.4
TPM3-207ENST00000341372 AAMPQ13685 434 aa12.53□□□□□ -0.4
TPM3-207ENST00000341372 GORABQ5T7V8 394 aa12.53□□□□□ -0.4
TPM3-207ENST00000341372 SPATA5Q8NB90 893 aa12.53□□□□□ -0.4
TPM3-207ENST00000341372 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
TPM3-207ENST00000341372 HHIPL1Q96JK4 782 aa12.53□□□□□ -0.4
TPM3-207ENST00000341372 PPP2R3BQ9Y5P8 575 aa12.53□□□□□ -0.4
TPM3-207ENST00000341372 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
TPM3-207ENST00000341372 PIK3CDO00329 1044 aa12.52□□□□□ -0.4
TPM3-207ENST00000341372 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.4
TPM3-207ENST00000341372 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.4
TPM3-207ENST00000341372 PI16Q6UXB8 463 aa12.52□□□□□ -0.4
TPM3-207ENST00000341372 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.4
TPM3-207ENST00000341372 JMYQ8N9B5 988 aa12.52□□□□□ -0.4
TPM3-207ENST00000341372 GAKO14976 1311 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 KDM4AO75164 1064 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 TIE1P35590 1138 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 RBM5P52756 815 aaKnown RBP eCLIP12.52□□□□□ -0.41
TPM3-207ENST00000341372 TTC39AQ5SRH9 613 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 APOBEC3HQ6NTF7 200 aaKnown RBP12.52□□□□□ -0.41
TPM3-207ENST00000341372 AACSQ86V21 672 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 CCDC8Q9H0W5 538 aaPredicted RBP12.52□□□□□ -0.41
TPM3-207ENST00000341372 DCTPP1Q9H773 170 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 IL1RAPL2Q9NP60 686 aa12.52□□□□□ -0.41
TPM3-207ENST00000341372 ZNF70Q9UC06 446 aaPredicted RBP12.52□□□□□ -0.41
TPM3-207ENST00000341372 MYO5AQ9Y4I1 1855 aaKnown RBP12.51□□□□□ -0.41
TPM3-207ENST00000341372 SSC5DA1L4H1 1573 aa12.51□□□□□ -0.41
TPM3-207ENST00000341372 CLRN2A0PK11 232 aa12.51□□□□□ -0.41
TPM3-207ENST00000341372 SPTY2D1Q68D10 685 aaPredicted RBP12.51□□□□□ -0.41
TPM3-207ENST00000341372 CLASRPQ8N2M8 674 aaKnown RBP12.51□□□□□ -0.41
TPM3-207ENST00000341372 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
TPM3-207ENST00000341372 DAGLAQ9Y4D2 1042 aa12.51□□□□□ -0.41
TPM3-207ENST00000341372 FKBP1BP68106 108 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 DPH6Q7L8W6 267 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 FAM163AQ96GL9 167 aaPredicted RBP12.5□□□□□ -0.41
TPM3-207ENST00000341372 TDRD3Q9H7E2 651 aaKnown RBP12.5□□□□□ -0.41
TPM3-207ENST00000341372 ZNF408Q9H9D4 720 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 SCAF8Q9UPN6 1271 aaKnown RBP12.5□□□□□ -0.41
TPM3-207ENST00000341372 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
TPM3-207ENST00000341372 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 TSNAXIP1Q2TAA8 658 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 ZNF384Q8TF68 577 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
TPM3-207ENST00000341372 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
TPM3-207ENST00000341372 ABT1Q9ULW3 272 aaKnown RBP12.5□□□□□ -0.41
TPM3-207ENST00000341372 RCCD1A6NED2 376 aa12.49□□□□□ -0.41
TPM3-207ENST00000341372 DEFB115Q30KQ5 88 aa12.49□□□□□ -0.41
TPM3-207ENST00000341372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.49□□□□□ -0.41
TPM3-207ENST00000341372 VEZTQ9HBM0 779 aa12.49□□□□□ -0.41
TPM3-207ENST00000341372 ABCF2Q9UG63 623 aa12.49□□□□□ -0.41
TPM3-207ENST00000341372 MKRN1Q9UHC7 482 aaKnown RBP12.49□□□□□ -0.41
TPM3-207ENST00000341372 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
TPM3-207ENST00000341372 MECOMQ03112 1051 aa12.49□□□□□ -0.41
TPM3-207ENST00000341372 CRTC2Q53ET0 693 aaPredicted RBP12.49□□□□□ -0.41
TPM3-207ENST00000341372 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
TPM3-207ENST00000341372 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
TPM3-207ENST00000341372 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms