RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 ATRNL1Q5VV63 1379 aa24.4■■□□□ 1.5
CLDND1-201ENST00000341181 WDR90Q96KV7 1748 aa24.4■■□□□ 1.5
CLDND1-201ENST00000341181 RRP12Q5JTH9 1297 aaKnown RBP24.4■■□□□ 1.5
CLDND1-201ENST00000341181 AMOTL1Q8IY63 956 aa24.4■■□□□ 1.5
CLDND1-201ENST00000341181 MB21D2Q8IYB1 491 aaPredicted RBP24.4■■□□□ 1.5
CLDND1-201ENST00000341181 ANP32EQ9BTT0 268 aa24.4■■□□□ 1.5
CLDND1-201ENST00000341181 LRRC2Q9BYS8 371 aa24.4■■□□□ 1.5
CLDND1-201ENST00000341181 TOMM22Q9NS69 142 aa24.4■■□□□ 1.5
CLDND1-201ENST00000341181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.4■■□□□ 1.5
CLDND1-201ENST00000341181 DCAF8L1A6NGE4 600 aa24.39■■□□□ 1.5
CLDND1-201ENST00000341181 BLOC1S2Q6QNY1 142 aa24.39■■□□□ 1.5
CLDND1-201ENST00000341181 RUFY3Q7L099 469 aa24.39■■□□□ 1.5
CLDND1-201ENST00000341181 FAM196BA6NMK8 535 aa24.39■■□□□ 1.49
CLDND1-201ENST00000341181 FKBP1CQ5VVH2 108 aa24.39■■□□□ 1.49
CLDND1-201ENST00000341181 DNAJC18Q9H819 358 aa24.39■■□□□ 1.49
CLDND1-201ENST00000341181 RPS6KB1P23443 525 aa24.38■■□□□ 1.49
CLDND1-201ENST00000341181 PSMA5P28066 241 aa24.38■■□□□ 1.49
CLDND1-201ENST00000341181 EPHX2P34913 555 aa24.38■■□□□ 1.49
CLDND1-201ENST00000341181 ANTXR2P58335 489 aa24.38■■□□□ 1.49
CLDND1-201ENST00000341181 NCOA7Q8NI08 942 aa24.38■■□□□ 1.49
CLDND1-201ENST00000341181 TTC14Q96N46 770 aa24.38■■□□□ 1.49
CLDND1-201ENST00000341181 CYP46A1Q9Y6A2 500 aa24.38■■□□□ 1.49
CLDND1-201ENST00000341181 KDM4AO75164 1064 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 FGRP09769 529 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 GABPAQ06546 454 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 RASA3Q14644 834 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 CYB5R4Q7L1T6 521 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 RALYLQ86SE5 291 aaKnown RBP24.37■■□□□ 1.49
CLDND1-201ENST00000341181 FAM151AQ8WW52 585 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 CSRNP1Q96S65 589 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 COL2A1P02458 1487 aaPredicted RBP24.37■■□□□ 1.49
CLDND1-201ENST00000341181 SCN4AP35499 1836 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 C16orf86Q6ZW13 317 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 TTC6Q86TZ1 520 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 FAM83AQ86UY5 434 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 SPRYD3Q8NCJ5 442 aa24.37■■□□□ 1.49
CLDND1-201ENST00000341181 LARP6Q9BRS8 491 aaKnown RBP24.36■■□□□ 1.49
CLDND1-201ENST00000341181 DHX36Q9H2U1 1008 aaKnown RBP24.36■■□□□ 1.49
CLDND1-201ENST00000341181 RNF41Q9H4P4 317 aaPredicted RBP24.36■■□□□ 1.49
CLDND1-201ENST00000341181 TAF1DQ9H5J8 278 aaPredicted RBP24.36■■□□□ 1.49
CLDND1-201ENST00000341181 PGAP2Q9UHJ9 254 aa24.36■■□□□ 1.49
CLDND1-201ENST00000341181 SERPINB13Q9UIV8 391 aa24.36■■□□□ 1.49
CLDND1-201ENST00000341181 TRDNQ13061 729 aa24.36■■□□□ 1.49
CLDND1-201ENST00000341181 NOL8Q76FK4 1167 aaKnown RBP24.36■■□□□ 1.49
CLDND1-201ENST00000341181 GPHNQ9NQX3 736 aaPredicted RBP24.36■■□□□ 1.49
CLDND1-201ENST00000341181 HLA-DOAP06340 250 aa24.35■■□□□ 1.49
CLDND1-201ENST00000341181 CDK8P49336 464 aa24.35■■□□□ 1.49
CLDND1-201ENST00000341181 DEFB129Q9H1M3 183 aa24.35■■□□□ 1.49
CLDND1-201ENST00000341181 ZSWIM5Q9P217 1185 aa24.35■■□□□ 1.49
CLDND1-201ENST00000341181 EXOSC10Q01780 885 aaKnown RBP24.35■■□□□ 1.49
CLDND1-201ENST00000341181 PDE4BQ07343 736 aa24.35■■□□□ 1.49
CLDND1-201ENST00000341181 FAM47AQ5JRC9 791 aa24.35■■□□□ 1.49
CLDND1-201ENST00000341181 DHX32Q7L7V1 743 aaKnown RBP24.35■■□□□ 1.49
CLDND1-201ENST00000341181 TEPSINQ96N21 525 aa24.35■■□□□ 1.49
CLDND1-201ENST00000341181 RANBP6O60518 1105 aaKnown RBP24.34■■□□□ 1.49
CLDND1-201ENST00000341181 SLC3A2P08195 630 aaKnown RBP24.34■■□□□ 1.49
CLDND1-201ENST00000341181 TNFAIP1Q13829 316 aa24.34■■□□□ 1.49
CLDND1-201ENST00000341181 DLK2Q6UY11 383 aa24.34■■□□□ 1.49
CLDND1-201ENST00000341181 ZNF526Q8TF50 670 aaPredicted RBP24.34■■□□□ 1.49
CLDND1-201ENST00000341181 CNNM2Q9H8M5 875 aa24.34■■□□□ 1.49
CLDND1-201ENST00000341181 PDRG1Q9NUG6 133 aa24.34■■□□□ 1.49
CLDND1-201ENST00000341181 PI4KBQ9UBF8 816 aa24.34■■□□□ 1.49
CLDND1-201ENST00000341181 PRC1O43663 620 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 ORC4O43929 436 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 POTEIP0CG38 1075 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 POTEJP0CG39 1038 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 RASA1P20936 1047 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 AK2P54819 239 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 BECN1Q14457 450 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 PRAMEF18Q5VWM3 479 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 ZKSCAN3Q9BRR0 538 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 KRT23Q9C075 422 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 EHD4Q9H223 541 aa24.33■■□□□ 1.49
CLDND1-201ENST00000341181 POLR2AP24928 1970 aaKnown RBP24.33■■□□□ 1.49
CLDND1-201ENST00000341181 IQCA1LA6NCM1 817 aa24.33■■□□□ 1.48
CLDND1-201ENST00000341181 HMGB1P09429 215 aaKnown RBP24.33■■□□□ 1.48
CLDND1-201ENST00000341181 SHMT1P34896 483 aa24.33■■□□□ 1.48
CLDND1-201ENST00000341181 MCM5P33992 734 aa24.32■■□□□ 1.48
CLDND1-201ENST00000341181 TOB2Q14106 344 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-201ENST00000341181 NBR1Q14596 966 aa24.32■■□□□ 1.48
CLDND1-201ENST00000341181 EAPPQ56P03 285 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-201ENST00000341181 USP50Q70EL3 339 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-201ENST00000341181 MKNK2Q9HBH9 465 aa24.32■■□□□ 1.48
CLDND1-201ENST00000341181 ST18O60284 1047 aa24.32■■□□□ 1.48
CLDND1-201ENST00000341181 TNNI2P48788 182 aa24.32■■□□□ 1.48
CLDND1-201ENST00000341181 SHROOM1Q2M3G4 852 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-201ENST00000341181 APOBEC3FQ8IUX4 373 aaKnown RBP24.32■■□□□ 1.48
CLDND1-201ENST00000341181 CRACR2BQ8N4Y2 399 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-201ENST00000341181 SLKQ9H2G2 1235 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-201ENST00000341181 NMT2O60551 498 aa24.31■■□□□ 1.48
CLDND1-201ENST00000341181 PCP11498 1178 aaKnown RBP24.31■■□□□ 1.48
CLDND1-201ENST00000341181 Q6ZUG5 572 aa24.31■■□□□ 1.48
CLDND1-201ENST00000341181 ESR2Q92731 530 aa24.31■■□□□ 1.48
CLDND1-201ENST00000341181 MIGA2Q7L4E1 593 aa24.3■■□□□ 1.48
CLDND1-201ENST00000341181 SENP2Q9HC62 589 aa24.3■■□□□ 1.48
CLDND1-201ENST00000341181 MYH8P13535 1937 aa24.3■■□□□ 1.48
CLDND1-201ENST00000341181 METTL16Q86W50 562 aaKnown RBP24.3■■□□□ 1.48
CLDND1-201ENST00000341181 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
CLDND1-201ENST00000341181 NMRK2Q9NPI5 230 aa24.3■■□□□ 1.48
CLDND1-201ENST00000341181 ADM5C9JUS6 153 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms