RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 VGLL4Q14135 290 aa15.83■□□□□ 0.12
TUBD1-202ENST00000340993 MCMDC2Q4G0Z9 681 aa15.83■□□□□ 0.12
TUBD1-202ENST00000340993 RGMBQ6NW40 437 aa15.83■□□□□ 0.12
TUBD1-202ENST00000340993 CAPNS2Q96L46 248 aa15.83■□□□□ 0.12
TUBD1-202ENST00000340993 ZIC5Q96T25 663 aa15.83■□□□□ 0.12
TUBD1-202ENST00000340993 ZNF341Q9BYN7 854 aa15.83■□□□□ 0.12
TUBD1-202ENST00000340993 ATRNL1Q5VV63 1379 aa15.83■□□□□ 0.12
TUBD1-202ENST00000340993 GSG1L2A8MUP6 293 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 USP17L12C9JPN9 530 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 USP17L21D6R901 530 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 KLRG1Q96E93 195 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 DDRGK1Q96HY6 314 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 DNAJC18Q9H819 358 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 LAMB1P07942 1786 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 IGSF3O75054 1194 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 RRP1BQ14684 758 aaKnown RBP15.82■□□□□ 0.12
TUBD1-202ENST00000340993 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.82■□□□□ 0.12
TUBD1-202ENST00000340993 CERS3Q8IU89 383 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 SLC10A4Q96EP9 437 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 HELLSQ9NRZ9 838 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 PI4KBQ9UBF8 816 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 CSADQ9Y600 493 aa15.82■□□□□ 0.12
TUBD1-202ENST00000340993 RASSF10A6NK89 507 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 CHMLP26374 656 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 CTR9Q6PD62 1173 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
TUBD1-202ENST00000340993 RASAL3Q86YV0 1011 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.81■□□□□ 0.12
TUBD1-202ENST00000340993 OTUD5Q96G74 571 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 ATP8A2Q9NTI2 1148 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 CCDC171Q6TFL3 1326 aa15.81■□□□□ 0.12
TUBD1-202ENST00000340993 FKBP1BP68106 108 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 ANKRD13AQ8IZ07 590 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 IFNL3Q8IZI9 196 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 HOOK2Q96ED9 719 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 NAPBQ9H115 298 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 DHX36Q9H2U1 1008 aaKnown RBP15.8■□□□□ 0.12
TUBD1-202ENST00000340993 DOCK1Q14185 1865 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
TUBD1-202ENST00000340993 PATL2C9JE40 543 aaKnown RBP15.8■□□□□ 0.12
TUBD1-202ENST00000340993 FOXP2O15409 715 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
TUBD1-202ENST00000340993 HAND2P61296 217 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 OPTNQ96CV9 577 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 SERPINB13Q9UIV8 391 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 SNCAIPQ9Y6H5 919 aa15.8■□□□□ 0.12
TUBD1-202ENST00000340993 PHF20L1A8MW92 1017 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 HIP1O00291 1037 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 PRDM1O75626 825 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 HSPD1P10809 573 aaKnown RBP15.79■□□□□ 0.12
TUBD1-202ENST00000340993 GNAT2P19087 354 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 GJA5P36382 358 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 LDLRAD1Q5T700 205 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 AMOTL1Q8IY63 956 aa15.79■□□□□ 0.12
TUBD1-202ENST00000340993 COL2A1P02458 1487 aaPredicted RBP15.78■□□□□ 0.12
TUBD1-202ENST00000340993 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
TUBD1-202ENST00000340993 JAG1P78504 1218 aa15.78■□□□□ 0.12
TUBD1-202ENST00000340993 CTDSPL2Q05D32 466 aa15.78■□□□□ 0.12
TUBD1-202ENST00000340993 BMP2KLQ5H9B9 411 aa15.78■□□□□ 0.12
TUBD1-202ENST00000340993 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
TUBD1-202ENST00000340993 INCENPQ9NQS7 918 aa15.78■□□□□ 0.12
TUBD1-202ENST00000340993 SLC10A3P09131 477 aa15.77■□□□□ 0.12
TUBD1-202ENST00000340993 MAP3K11Q16584 847 aa15.77■□□□□ 0.12
TUBD1-202ENST00000340993 DNAJC5GQ8N7S2 189 aa15.77■□□□□ 0.12
TUBD1-202ENST00000340993 PICK1Q9NRD5 415 aa15.77■□□□□ 0.12
TUBD1-202ENST00000340993 FAM155AB1AL88 458 aaPredicted RBP15.77■□□□□ 0.11
TUBD1-202ENST00000340993 C12orf60Q5U649 245 aa15.77■□□□□ 0.11
TUBD1-202ENST00000340993 WNK4Q96J92 1243 aa15.77■□□□□ 0.11
TUBD1-202ENST00000340993 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.11
TUBD1-202ENST00000340993 SHMT1P34896 483 aa15.76■□□□□ 0.11
TUBD1-202ENST00000340993 ECE1P42892 770 aa15.76■□□□□ 0.11
TUBD1-202ENST00000340993 RAB3GAP1Q15042 981 aa15.76■□□□□ 0.11
TUBD1-202ENST00000340993 CLEC10AQ8IUN9 316 aa15.76■□□□□ 0.11
TUBD1-202ENST00000340993 HERC5Q9UII4 1024 aaKnown RBP15.76■□□□□ 0.11
TUBD1-202ENST00000340993 TRIM75PA6NK02 468 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 GH2P01242 217 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 FGAP02671 866 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 KIF23Q02241 960 aaPredicted RBP15.75■□□□□ 0.11
TUBD1-202ENST00000340993 PTH1RQ03431 593 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 DGKZQ13574 1117 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 CERKLQ49MI3 558 aaPredicted RBP15.75■□□□□ 0.11
TUBD1-202ENST00000340993 FOXP4Q8IVH2 680 aaPredicted RBP15.75■□□□□ 0.11
TUBD1-202ENST00000340993 SCYL3Q8IZE3 742 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 TOMM22Q9NS69 142 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 ZNF112Q9UJU3 913 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 PHIPQ8WWQ0 1821 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 CDK8P49336 464 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 PPARAQ07869 468 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 RRP12Q5JTH9 1297 aaKnown RBP15.75■□□□□ 0.11
TUBD1-202ENST00000340993 SPRYD7Q5W111 196 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 RUFY2Q8WXA3 655 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 TSKSQ9UJT2 592 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 ZHX2Q9Y6X8 837 aa15.75■□□□□ 0.11
TUBD1-202ENST00000340993 IRF6O14896 467 aa15.74■□□□□ 0.11
TUBD1-202ENST00000340993 TBC1D12O60347 775 aa15.74■□□□□ 0.11
TUBD1-202ENST00000340993 CTNND1O60716 968 aaKnown RBP15.74■□□□□ 0.11
TUBD1-202ENST00000340993 CDC45O75419 566 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms