RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SLURP2P0DP57 97 aa11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 NDUFA8P51970 172 aa11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 TFAP4Q01664 338 aa11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 KIF23Q02241 960 aaPredicted RBP11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 CTR9Q6PD62 1173 aa11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 CABP5Q9NP86 173 aa11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.52
RBFOX1-202ENST00000340209 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 CTCFLQ8NI51 663 aaPredicted RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 XDHP47989 1333 aa11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 LETM1O95202 739 aaPredicted RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 SLC3A2P08195 630 aaKnown RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 CACNB3P54284 484 aa11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 ENAHQ8N8S7 591 aaPredicted RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 RIOK1Q9BRS2 568 aaKnown RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.53
RBFOX1-202ENST00000340209 TSPY3P0CV98 308 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 TSPY8P0CW00 308 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 ANO1Q5XXA6 986 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 ZSCAN10Q96SZ4 725 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 MPHOSPH10O00566 681 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 BTDP43251 543 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 ZNF827Q17R98 1081 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 CLEC10AQ8IUN9 316 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 ZSCAN29Q8IWY8 852 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 GPKOWQ92917 476 aaPredicted RBP eCLIP11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 PDE4BQ07343 736 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 CLSTN2Q9H4D0 955 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 TCP10Q12799 353 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 AGXT2Q9BYV1 514 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
RBFOX1-202ENST00000340209 TM4SF1P30408 202 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 FILIP1Q7Z7B0 1213 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 ZSCAN30Q86W11 494 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 KAT14Q9H8E8 782 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 COL22A1Q8NFW1 1626 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 BAG3O95817 575 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 C11orf57Q6ZUT1 292 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 SPTY2D1Q68D10 685 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 POLLQ9UGP5 575 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
RBFOX1-202ENST00000340209 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 CHRNA5P30532 468 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 KIAA2012Q0VF49 1180 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 KIAA0825Q8IV33 1275 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 AOPEPQ8N6M6 819 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 STAMQ92783 540 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 AKAP11Q9UKA4 1901 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 PPEF1O14829 653 aaPredicted RBP11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 NLRP5P59047 1200 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 ZNF174Q15697 407 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 LINC00301Q8NCQ3 95 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 WDR66Q8TBY9 1149 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 PNPLA7Q6ZV29 1317 aa11.74□□□□□ -0.53
RBFOX1-202ENST00000340209 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 PLCD1P51178 756 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 FAM160A1Q05DH4 1040 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 GRAMD1CQ8IYS0 662 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 SMC2O95347 1197 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 SYKP43405 635 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 EN1Q05925 392 aaPredicted RBP11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 HEATR3Q7Z4Q2 680 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 PROM2Q8N271 834 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 PFKFB1P16118 471 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 RCOR1Q9UKL0 485 aa11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-202ENST00000340209 ELP1O95163 1332 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 VEGFAP15692 232 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 XBP1P17861 261 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 GRIN1Q05586 938 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 ALX1Q15699 326 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 KCNG4Q8TDN1 519 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 PLIN2Q99541 437 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms