RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 EGFRP00533 1210 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 CYP2D6P10635 497 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 EPS15P42566 896 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 ANKRD1Q15327 319 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 RBM26Q5T8P6 1007 aaKnown RBP17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 C16orf86Q6ZW13 317 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 MB21D2Q8IYB1 491 aaPredicted RBP17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 FAM151AQ8WW52 585 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 ESR2Q92731 530 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 MTA3Q9BTC8 594 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 VEZTQ9HBM0 779 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 PI4KBQ9UBF8 816 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 SERPINB13Q9UIV8 391 aa17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
NIPAL3-202ENST00000339255 PLCD1P51178 756 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 TCP10Q12799 353 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 HSCBQ8IWL3 235 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 ZSCAN29Q8IWY8 852 aaPredicted RBP17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 FBXL16Q8N461 479 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 TTC14Q96N46 770 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 TOMM22Q9NS69 142 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 PDRG1Q9NUG6 133 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 SWAP70Q9UH65 585 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 HACL1Q9UJ83 578 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 B4E1Z4 1266 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
NIPAL3-202ENST00000339255 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
NIPAL3-202ENST00000339255 PITPNM2Q9BZ72 1349 aa17.15■□□□□ 0.34
NIPAL3-202ENST00000339255 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
NIPAL3-202ENST00000339255 TRPM4Q8TD43 1214 aa17.15■□□□□ 0.34
NIPAL3-202ENST00000339255 MKNK2Q9HBH9 465 aa17.15■□□□□ 0.34
NIPAL3-202ENST00000339255 KDM4AO75164 1064 aa17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 FGD1P98174 961 aa17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 EXOSC10Q01780 885 aaKnown RBP17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 GABPAQ06546 454 aa17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 SLC4A8Q2Y0W8 1093 aa17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 USP50Q70EL3 339 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 FOXP4Q8IVH2 680 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 TMEM87BQ96K49 555 aa17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 CSRNP1Q96S65 589 aa17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 HERC5Q9UII4 1024 aaKnown RBP17.14■□□□□ 0.33
NIPAL3-202ENST00000339255 DDTLA6NHG4 134 aaPredicted RBP17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 PRC1O43663 620 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 CPA1P15085 419 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 METTL16Q86W50 562 aaKnown RBP17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 ZFPM1Q8IX07 1006 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 PPP2R3BQ9Y5P8 575 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 RANBP6O60518 1105 aaKnown RBP17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 CDK8P49336 464 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 EVX2Q03828 476 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 SH3BP5LQ7L8J4 393 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 IQCA1Q86XH1 822 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 HOOK2Q96ED9 719 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 ZSWIM5Q9P217 1185 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 TACC3Q9Y6A5 838 aa17.13■□□□□ 0.33
NIPAL3-202ENST00000339255 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 PRDM1O75626 825 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 EPHX2P34913 555 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 AK2P54819 239 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 ANTXR2P58335 489 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 RASA3Q14644 834 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 ANGEL2Q5VTE6 544 aaKnown RBP17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 PNMA8AQ86V59 439 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 GREB1LQ9C091 1923 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-202ENST00000339255 ERICH2A1L162 156 aa17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 TSPY2A6NKD2 308 aa17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 RASA1P20936 1047 aa17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 CCDC178Q5BJE1 867 aa17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 IPO9Q96P70 1041 aaKnown RBP17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 INCENPQ9NQS7 918 aa17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 LIMCH1Q9UPQ0 1083 aa17.11■□□□□ 0.33
NIPAL3-202ENST00000339255 TBC1D12O60347 775 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 COL9A3Q14050 684 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 Q6ZUG5 572 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 CYB5R4Q7L1T6 521 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 SLC44A5Q8NCS7 719 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 TCEANC2Q96MN5 208 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 DEFB129Q9H1M3 183 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms